Ticket #1: 5s-rRNA.aa

>D.mobilis.1 X07545.1/505-619
..A..CCC.GG.C.C.AU.AGU....GG.C.C.G.G...GC..........A.AC.A...
.......C..CCG....G.UC....UCGUUUC......GA.ACCCG.GA.AGUUAA.G..
...............CCGGCCACG.U..C...AG..AACG....GCCGUGAGG..UCCGA
GAG.G..CCUC.GCA...G..CCGUU....CU.G.A.G.CU..G.GGAU..
>P.occultum.1 M21086.1/8-123
..A..CCC.GG.C.C.AU.AGC....GG.C.C.G.G...GC..........A.AC.A...
.......C..CCG....G.AC....UCAUGUC......GA.ACCCG.GA.AGUUAA.G..
...............CCGGCCGCG.U..U...GG..GGGAU...GCUGUGGGG..UCCGC
GAG.G.CCCC..GCA...G..CGCCC....CC.A.A.G.CC..G.GGAU..
>Sulfolobus.1 M16530.1/8-123
....ACCC.GG.C.A.AU.AGGC...GC.C.G.G.U...GC..........U.AC.G...
.......C..CCG....G.UC....UCUUCA.......GA.ACCCG.GA.AGCUAA.G..
...............GCCGGCG.C.C..G...CGGACGGGA...GUACUGGGG..UCCGC
GAG.G.CCCCG.GGA...A...ACCG...CCG.U...G.CU..G.GGA...
>S.solfataricus.1 X01588.1/5-119
..A..CCC.GG.U.C.AC.AGU....GA.G.C.G.G...GC..........A.AC.A...
.......C..CCG....G.AC....UCAUUUC......GA.ACCCG.GA.AGUUAA.G..
...............CCGCUCACG.U..U...AG..UGGG....GCCGUGGAU..ACCGU
GAG.G.AUCC..GCA...G..CCCCA....CU.A.A.G.CU..G.GGAU..
>Sulfolobus.2 X05870.1/304-418
..A..CCC.GG.C.C.AC.AGU....GA.G.C.G.G...GC..........A.AC.A...
.......C..CCG....G.AC....UCAUUUC......GA.ACCCG.GA.AGUUAA.G..
...............CCGCUCACG.U..U...GG..UGGG....GCCGUGGAU..ACCGU
GAG.G.AUCC..GCA...G..CCCCA....CU.A.A.G.CU..G.GGAU..
>S.acidocaldarius.1 U05019.1/544-658
..A..CCC.GG.U.C.AU.AGU....GA.G.C.G.G...GU..........A.AC.A...
.......C..CCG....G.AC....UCGUUUC......GA.ACCCG.GA.AGUUAA.G..
...............CCGCUCA.C.G..U...CA..GAGGG...GCCGUGGGA..UCCGA
GAG.G.GCCC..GCA...G.CCUCUC....UG.A...G.CU..G.GGAU..
>H.vallismortis.1 L27163.1/1-119
...GUAGC.GG.C.C.AC.AGC....GG.U.G.G.G...GU..........U.CC.U...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGAUAA.G..
...............CCCACCA.G.C..GUU.CC..GGGGA...GUACUGGAG..UGCGC
GAC.C.CUCUG.GGA...A...ACCG....GGUU.C.G.CC..G.CUAC..
>H.japonica.1 L27170.1/1-120
..AGUGGU.GG.C.C.AU.AUC....GG.C.G.G.G...GU..........U.CC.U...
.......CC.CCG....U.AC....CCAUCCU......GA.ACACG.GA.AGAUAA.G..
...............CCCGCCA.G.C..G...UC..CGGCAA..GUACUGGAG..UGCGC
GAG.C.CUCUG.GGA...A..AUCCG....GU.U.C.G.CC..G.CCAC..
>H.marismortui.1 AF034619.1/5584-5700
.....GGC.GG.C.C.AC.AGC....GG.U.G.G.G...GU..........U.GCCU...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGAUAA.G..
...............CCCACCA.G.C..GUU.CC..AGGGA...GUACUGGAG..UGCGC
GAG.C.CUCUG.GGA...A...AUCC....GGUU.C.G.CC..G.CCA...
>H.salinarum.1 X03407.1/5927-6048
..UAAGGC.GG.C.C.AU.AGC....GG.U.G.G.G...GU..........U.AC.U...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGAUAA.G..
...............CCCGCCU.G.C..GUU.CC..GGUCA...GUACUGGAG..UGCGC
GAG.C.CUCUG.GGA...A...AUCC....GGUU.C.G.CC..G.CCUACU
>Halobacterium.1 L27343.1/3-116
......GC.GG.C.C.AG.GGC....GG.A.G.G.G...GA..........A.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUGAA.G..
...............CCCUCCA.G.C..GAA.CC..AGCUA...GUACUAGAG..UGGGA
GAC.C.CUCUG.GGA...G...CGCU....GGUU.C.G.CC..G.CC....
>Halobacterium.2 L27168.1/1-120
...UUGGC.GA.C.C.AU.AGC....GG.C.G.A.G...UG..........A.CC.U...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGAUAA.G..
...............CUCGCCU.G.C..GUU.UC..GGUCA...GUACUGGAU..UGGGC
GAC.C.CUCUG.GGA...A...AUCU....GAUU.C.G.CC..G.CCACC.
>H.morrhuae.1 X72588.1/6990-7093
......GC.GG.C.C.AC.AGC....GG.C.G.G.G...GC..........G.AC.U...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GC.AGAUAA.G..
...............CCCGCCA.G.C..G...UUCCAGCGA...GUACUGGAG..UGUGC
GAA.C.CUCUG.GGA...A...AACU...........G.............
>H.mediterranei.1 X14441.1/5-123
....GGGC.GG.C.C.AG.AGC....GG.U.G.A.G...GU..........U.CC.A...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUCGCCU.G.C..GU..UC..UGGUCA..GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A..AUCCA....GU.U.C.G.CC..G.CCCCU.
>H.volcanii.1 X02128.1/24-139
.....GGC.GG.C.C.AG.AGC....GG.U.G.A.G...GU..........U.CC.A...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUCACCU.G.C..GU..UC..UGGUCA..GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A..AUCCA....GU.U.C.G.CC..G.CCC...
>H.terrestre.1 L27169.1/1-121
..GUAGGC.GG.C.C.AG.AGC....GG.U.A.G.G...GA..........A.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUUAA.G..
...............CCUACCA.G.C..GUA.UC..GUGAA...GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A...CCAC....GAGU.C.G.CC..G.CCUAC.
>H.distributum.1 L27166.1/1-122
..GUAGGC.GG.C.C.AG.AGC....GG.U.A.G.G...GA..........A.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUUAA.G..
...............CCUACCA.G.C..GUA.UC..GUGAA...GUACUGGAG..UGAGC
GAU.C.CUCAG.GGA...A...CCAC....GAGU.C.G.CC..G.CCUACC
>H.saccharovorum.1 L27162.1/2-122
..GCA.GC.GG.C.C.AU.AGC....GG.U.G.G.G...GC..........G.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUUAA.G..
...............CCCACCA.G.C..GUA.CC..GGGAA...GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A...GCGG....GGUU.C.G.CC..G.CCUGCC
>H.terrestre.2 L27167.1/1-122
..GAAGGC.GG.C.C.AG.AGC....GG.U.G.G.G...GA..........A.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUUAA.G..
...............CCCACCA.G.C..GUA.CC..GUGAA...GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A...CCAC....GAGU.C.G.CC..G.CCUGCC
>H.distributum.2 L27236.1/1-122
..GUAGGC.GG.C.C.AG.AGC....GG.U.A.G.G...GA..........A.AC.A...
.......C..CCG....U.AC....CCAUUCC......GA.ACACG.GA.AGUUAA.G..
...............CCUACCA.G.C..GU..AU..CGUGAA..GUACUGGAG..UGAGC
GAU.C.CUCUG.GGA...A..CCGCG....GU.U.C.G.CC..G.CCUGCC
>N.magadii.1 X72495.1/5075-5190
....AGGC.GG.C.C.AU.CGC....GG.C.G.G.G...GU..........U.CC.U...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.AGAUAA.G..
...............CCUGCCU.G.C..GUA.UU..GGUGA...GUACUGGAG..UGGGA
GAC.C.CUCUG.GGA...G...AGCC....GAUU.C.G.CC..G.CC....
>M.formicicum.1 X62859.1/3-124
..GUUGGC.GG.C.C.AU.AGC....GG.A.G.G.G...GC..........C.AU.A...
.......C..CUG....G.UC....UCGUUUC......GA.UCCCA.GA.AGUGAA.G..
...............UCCUCCU.G.C..G...UU..UUGUUGUUGUACUGUGG...ACGA
GAG.U.CUAUG.GGA...A.GCUCAU....AA.C...G.CU..G.CCGGCC
>M.thermautotrophicus.1 X62858.1/1-121
..GUUGGC.GG.U.C.AU.GGC....GU.G.G.G.G...UU..........A.AU.A...
.......C..CUG....A.UC....UCGUUUC......GA.UCUCA.GU.AGUUAA.G..
...............UCCUGCU.G.C..GUU.GU..GGGUGU..GUACUGCGG..UUUUU
UG....CUGUG.GGA...A...GCCC....ACUU.C.A.CU..G.CCAGCA
>M.thermautotrophicus.2 M36187.1/5-126
..UUUGGC.GG.U.C.AU.GGC....GU.G.G.G.G...GUU.........U.AU.A...
.......C..CUG....A.UC....UCGUUUC......GA.UCUCA.GU.AGUUAA.G..
...............UCCUGCU.G.C..GUU.GU..GGGUGU..GUACUGCGG..UUUUU
UG....CUGUG.GGA...A...GCCC....ACUU.C.A.CU..G.CCAGAC
>M.thermautotrophicus.3 M36186.1/5-125
..CAUGGC.GG.U.C.AU.GGC....GC.A.G.G.G...GU..........U.AU.A...
.......C..CUG....A.UC....UCGUUUC......GA.UCUCA.GU.AGUUAA.G..
...............UCCUGCU.G.C..GUU.GU..GGGUGU..GUACUGCGG..UUUUU
UG....CUGUG.GGA...A...GCCC....ACUU.C.A.CU..G.CCAGCC
>M.thermautotrophicus.4 X62857.1/1-121
..GUUGGC.GG.U.C.AU.GGC....GU.G.G.G.G...UU..........U.AU.A...
.......C..CUG....A.UC....UCGUUUC......GA.UCUCA.GU.AGUUAA.G..
...............UCCUGCU.G.C..GUU.GU..GGGUGU..GUACUGCGG..UUUUU
UG....CUGUG.GGA...A...GCCC....ACUU.C.A.CU..G.CCAGAC
>M.thermautotrophicus.5 X15364.1/6601-6721
..UUUGGC.GG.U.C.AU.GGC....GU.G.G.G.G...GU..........U.AU.A...
.......C..CUG....A.UC....UCGUUUC......GA.UCUCA.GU.AGUUAA.G..
...............UCCUGCU.G.C..GUU.GU..GGGUGU..GUACUGCGG..U..GU
UUU.G.CUGUG.GGA...A...GCCC....AUUU.C.A.CU..G.CCAGCC
>M.fervidus.1 M26976.1/105-223
..UACGGC.GA.C.C.AU.AGC....GG.G.G.G.G...GC..........C.AC.A...
.......C..CUG....A.AC....CCGUUCC......GA.UCUCA.GA.AGUUAA.G..
...............CCCCCCU.G.CG.U...UG..GAGGUG..GUACUGCA....ACGU
UAG.U.UGCGG.GAA...G...CCUC....CA.A.C.G.UC..G.CCGGCC
>M.vannielii.1 X00916.1/1218-1332
..UACGGC.GG.U.C.AU.AGC....GG.G.G.G.U...GU..........A.AC.A...
.......U..CCG....A.UC....CCAUCCC......GA.UCUCG.GA.AAUUAA.G..
...............CCCUCCA.G.C..G...AU..UCCUUAA.GUACUGCUA..U...C
UA......GUG.GGA...A.CAAGGU....GA.C...G.CU..G.CCGAUC
>M.vannielii.2 X02729.1/3021-3135
..CAUAAC.GG.U.C.AA.AGC....GG.A.G.G.U...GU..........A.AC.A...
.......U..CCG....A.UC....CCAUCCC......GA.UCUCG.GA.AAUUAA.G..
...............CCCUCCA.G.C..G...AU..UCUUUAA.GUACUGCUA..U...C
UA......GUG.GGA...A.CAAAGU....GA.C...G.CC..G.UUAGUC
>M.thermolithotrophic.1 M34911.1/4-118
..UAUAAC.GG.U.C.AU.AGC....GG.A.G.G.A...GC..........C.AC.A...
.......U..CCG....A.UC....CCGUCCC......GA.UCUCG.GA.AAUUAA.G..
...............CCCUCCA.G.C..G...AU..ACCCUAA.GUACUGCCA..U...U
UG......GUG.GGA...A..CAGGG....UG.A.C.G.CU..G.UUGAUC
>M.methylutens.1 X62863.1/2-121
..GCUAGU.GG.C.C.AU.AGU....GG.C.A.G.G...GA..........C.CC.U...
.......C..CUG....U.UC....ACCUUCC......GA.ACACA.GA.AGAUAA.G..
...............CCUGCCC.A.C..GUU.GC..UUACU...GUACUGAGG..UAC.A
GAG.U.CCUCG.GGA...A...AUCU....GCGU.C.G.CU..G.CUAGC.
>M.evestigatum.1 X62861.1/3-124
...UUAGC.GG.C.C.AU.GGC....GG.C.A.G.G...GUU.........A.AC.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GA.AGAUAA.G..
...............CCUGCCA.G.C..GUU.GU..AUACG...GUACUAAAG..UGCGA
GAG.C.CUUUG.GGA...A...CUAU....ACUC.C.G.CU..G.CUGAUC
>M.halophilus.1 X62860.1/3-123
...UUGGC.GG.C.C.AU.GGC....GG.C.G.G.G...GU..........A.AC.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GC.AGAUAA.A..
...............CCCGCCC.G.C..GU..UC..CGUACG..GUACUAAAG..UGCGC
GAG.C.CUUUG.GGA...A..CUGCG....GA.U.A.G.CU..G.CCAGCU
>M.tindarius.1 X62862.1/2-123
..GGUGGC.GG.C.C.AU.AGC....GG.C.G.G.G...GC..........A.AU.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GA.AGAUAA.G..
...............CCCGCCU.G.CG.U...UC..UAUACU..GUACUAAAG..UAUGA
GAG.U.CUUUG.GGA...A..AUAUG....GA.A.C.G.CU..G.CCACCA
>M.tindarius.2 M34910.1/5-126
..UUUGGC.GG.C.C.AU.AGC....GG.C.G.G.G...GC..........A.AU.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GA.AGAUAA.G..
...............CCCGCCU.G.CG.U...UC..UAUACU..GUACUAAAG..UAUGA
GAG.U.CUUUG.GGA...A..AUAUG....GA.A.C.G.CU..G.CCAUCU
>M.barkeri.1 M36188.1/5-125
..UUUGGC..G.C.C.AU.AGC....GG.C.A.G.U...GU..........A.AC.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GU.AGAUAA.G..
...............CCUGCCC.G.C..GUU.CC..UUACU...GUACUGAAG..UGUGC
GAG.C.CUUCG.GGA...A...CUCU....GGAU.C.G.CU..G.CCAUAC
>M.vacuolata.1 X62864.1/3-123
..UCUGGC.AG.C.C.AU.AGC....GG.C.A.G.G...UG..........U.AA.U...
.......C..CUG....U.AC....CCAUCCC......GA.ACACA.GU.AGAUAA.G..
...............CCUGCCC.G.C..GUUCCU..UGCCU...GUACUGAAG..UGUGC
GAG.C..UUCG.GGA...A...CUCU....GGAU.C.G..U..G.CCAUAU
>M.acetivorans.1 X62865.1/3-123
...UUGGC.GG.U.C.AU.GAC....GG.C.A.G.G...GU..........A.AC.U...
.......C..CUG....U.AC....CCAUUCC......GA.ACACA.GC.AGAUAA.G..
...............CCUGCCC.G.U..GUU.CC..UUACU...GUACUGAAG..UGUGC
GAG.C.CUUCG.GGA...A...CUCU....GGAU.C.G.CU..G.CCAACU
>P.woesei.1 X15329.1/3-123
..UACGGC.GG.U.C.AU.AGC....GG.G.G.G.G...GC..........C.AC.A...
.......C..CCG....G.UC....UCAUUUC......GA.ACCCG.GA.AGUUAA.G..
...............CCCCCCA.G.CGAU...CC..CGGCU...GUACUGCCC..UCCGA
GAG.G.GGGCG.GGA...A...CCGG....GG.A.C.G.CC..G.CCGGCC
>T.celer.1 X07692.1/700-821
..UACGGC.GG.U.C.AU.AGC....GG.C.G.G.G...GU..........C.AC.A...
.......C..CCG....G.UC....UCGUUUC......GA.CCCCG.GA.AGUUAA.G..
...............CCCGCCA.G.C..GAU.CC..CGGUU...GUACUGCCC..UCCGG
GAG.G.GGGCG.GGA...A...GCCG....GGGA.C.G.CC..G.CCGGCC
>T.acidophilum.1 AL445066.1/280290-280410
..GGCAAC.GG.U.C.AU.AGC....AG.C.A.G.G...GA..........A.AC.A...
.......C..CAG....A.UC....CCAUUCC......GA.ACUCG.AC.GGUUAA.G..
...............CCUGCUG.C.G..U...AU..UGCGUU..GUACUGUAU..GCCGC
GAG.G.GUACG.GGA...A..GCGCA....AU.A.U.G.CU..G.UUACCA
>C.variabile.1 M16176.1/4-120
..GUCGGU.GG.U.G.UU.AGC....GG.U.G.G.G...GU..........C.AC.G...
.......C..CCG....G.UC....CCUUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCU.G.C..G...CC..GAUG....GUACUGCAC...CUGG
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.C.CC..G.CCGGCA
>C.xerosis.1 M16177.1/4-120
..GUCGGU.GG.U.U.AU.AGC....GG.U.G.G.G...GU..........C.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCACCU.G.C..G...CC..GAUG....GUACUGCAC...CUGG
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCGGCC
>C.diphtheriae.1 X55255.1/4-120
..GUUGGU.GG.U.U.AU.UGU....GU.C.G.G.G...GG..........U.AC.G...
.......C..CCG....G.UC....CCUUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCGAUU.G.C..G...CU..GAUG....GUACUGCAC...CUGG
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAACC
>M.phlei.1 X55259.1/3-117
..UACGGC.GG.U.CAAU.AGC....GG.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..AAUGA....UACUGCCC..U....
CAC.C.GGGUG.GAA...A...AGUA....GG.A.C.A.CC..G.CCGAAC
>M.smegmatis.1 X55251.1/3-116
..UACGGC.GG.UCC.AU.AGC....GG.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUGA....UACUACCC...AUCC
GGG.U.......GGA...A..AAGUA....GG.A.C.A.CC..G.CCGAAC
>M.tuberculosis.1 X75601.1/91-203
..UACGGC.GG.C.C.AC.AGC....GG.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUGA....UACUGCC....CCUC
CGG.G.U.....GGA...A..AAGUA....GG.A.C.A.CC..G.CCGAAC
>M.bovis.1 X05526.1/2-115
..UACGGC.GG.C.C.AU.AGC....GG.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUGCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUGA....UACUGCC....CCUC
CGG.G.GU....GGA...A..AAGUA....GG.G.C.A.CC..G.CCGAAC
>N.asteroides.1 X55261.1/3-119
..UACGGC.GG.U.U.AU.AGC....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............GCCACCU.G.C..G...CC..GAUG....GUACUGCAC...UCGA
CAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAA
>R.erythropolis.1 X05057.1/3-119
..UACGGC.GG.U.C.AU.AGC....GA.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUUCA.G.C..G...CC..GAUG....GUACUGCAC...UCGA
CAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>R.fascians.1 X15126.1/3-120
..UACGGC.GG.C.C.AU.AGC....GG.A.G.G.G...GA..........A.ACCG...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGA
CAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>R.rhodochrous.1 X55254.1/3-119
..UACGGC.GG.C.C.AU.AGC....GA.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGUCU.G.C..G...CC..GAUG....GUACUGCAC...UCGA
CAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>Rhodococcus.1 AF001265.1/6033-6149
..UACGGC.GG.U.C.AU.AGC....GA.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUUCA.G.C..G...CC..GAUG....GUACUGCAC...UCGA
CGG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>Frankia.1 M55343.1/5620-5736
..UUCGGU.GG.U.U.UU.GGC....GA.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....UCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUACUGCA...UGGGG
GAC.U.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>G.obscurus.1 X55265.1/3-119
..UUCGGU.GG.U.C.AU.GGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GA.A.C.A.CC..A.CCGAAC
>B.linens.1 M16205.1/4-122
..UGCGGU.GG.U.G.AU.AGU....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UUAA..CCGUUCC......GA.UCCCG.GU.AGCUAA.G..
...............CCCAUUC.G.C..G...CU..GAUG....GUACUGCAA...CUUG
GUG.G.UUGUG.GGA...G...AGUA....AG.U.G.A.CU..G.CCGCAA
>B.casei.1 X55264.1/4-122
..UGCGGU.GG.U.G.AU.AGU....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UUAA..CCGUUCC......GA.UCCCG.GU.AGCUAA.G..
...............CCCAUGU.A.U..G...CU..GAUG....GUACUGCAA...CUUG
GUG.G.UUGUG.GGA...G...AGUA....AG.U.G.A.CU..G.CCGCAA
>B.helvolum.1 X08003.1/3-119
..UACGGC.GG.U.C.AU.AGC....GU.G.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............ACCCACA.G.C..G...CC..GAUG....GUACUGCAC...CCGG
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCGGAA
>C.biazotea.1 M16172.1/3-119
..UACGGC.GG.U.C.AU.AGC....GA.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUUCA.G.C..G...CC..GAUG....GUACUGCAC...UCGC
CAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>O.turbata.1 X55263.1/3-119
..UACGGC.GG.U.C.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCUCA.G.C..G...CC..GAUG....GUACUGCCC...UGGA
GAC.G.GGGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGGAC
>C.michiganensis.1 S73542.1/3-119
..UUCGGC.GG.C.C.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............ACUCUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>C.citreum.1 M16171.1/3-119
..UCCGGU.GG.U.G.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UG....AGAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCUCA.G.C..G...CC..GAUG....GUACUGCAA...GGGG
GAC.C.UUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>L.xyli.1 M60936.1/3-119
..UUCGGC.GG.C.C.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............ACUCUCU.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>L.aquatica.1 M16169.1/3-119
..UUCGGC.GG.C.C.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....AUAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............ACUCUCU.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>M.testaceum.1 M16170.1/3-119
..UUCGGC.GG.C.C.AU.AGC....GA.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....AUAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>A.globiformis.1 M16173.1/3-119
..UACGGC.GG.U.C.AU.AGC....GU.G.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............ACCCACA.G.C..G...CC..GAUG....GUACUGCAC...CCGG
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCGGAC
>M.luteus.1 K02682.1/2-118
..UCUGGC.GG.C.C.AU.AGC....GU.G.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCCAUA.G.C..G...CC..GAUG....GUACUGCAA...CCGG
GAG.G.UUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGGAC
>M.luteus.2 K02683.1/2-118
..UUCGGU.GG.U.C.AU.AGC....GU.G.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUGCC......GA.ACCCG.GU.AGCUAA.G..
...............NCCCACA.G.C..G...CU..GAUG....GUACUGCAC...UCGG
UAG.G.GUGUG.GGA...G...AGUA....AG.U.C.A.CC..G.CCGGAA
>C.cellulans.1 X05516.1/3-119
..UACGGC.GG.U.C.AU.AGC....GA.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUACC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUUCA.G.C..G...CC..GAUG....GUACUGCCC...UGAA
GAC.G.GGGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>D.aurantiacum.1 X55267.1/3-119
..UACGGC.GG.C.C.AU.AGC....GG.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...CCGA
GAG.A.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>N.albus.1 X55260.1/3-119
..UACGGC.GG.C.C.AU.AGC....GA.A.G.G.G...GA..........A.AU.A...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGUCAA.G..
...............CCCUUCA.G.C..G...CC..GAUG....GUACUGCAA...CCGA
GAG.G.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>P.simplex.1 M16174.1/3-119
..UACGGC.GG.C.C.AU.AGC....GG.C.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UC....CCAUGCC......GA.ACCCG.GA.AGUUAA.G..
...............CCUGCCA.G.C..G...CC..GAUG....GUACUGCAA...CCGA
GAG.G.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>A.riparia.1 Z50737.1/3-119
..AACGGC.GG.U.C.AU.AGC....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCACCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAC
>S.australiensis.1 D13619.1/3-119
..UUCGGU.GG.U.U.AU.GGC....GG.A.G.G.G...GG..........A.AC.A...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GU.AGUUAA.G..
...............CCUUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.mutabilis.1 Z50074.1/3-119
..UUCGGU.GG.U.C.AU.GGC....GG.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............UCCUCCA.G.C..G...CC..GAUG....GUACUGCA...UGCGU
GAG.C.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>A.methanolica.1 Z50060.1/3-119
..UUCGGU.GG.U.U.AU.GGC....GG.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUG....GUACUGCAC...CCCC
GCG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>A.orientalis.1 Z50061.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGACA.G.C..G...CC..GAUG....GUACUGCAA...CCGA
AGG.G.UUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>A.mediterranei.1 Z50059.1/3-119
..UUCGGU.GG.U.U.UU.AGC....GU.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGACA.G.C..G...CC..GAUG....GUACUGCAA...CCGA
AGG.G.UUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>C.cryophila.1 Z50078.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GG.U.U.G.G...GG..........A.AC.A...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GU.AGUUAA.G..
...............CCUUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>K.aridum.1 Z50055.1/3-119
..UACGGU.GG.U.U.AU.AGC....GA.A.G.A.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUACUGCAC...UGGG
UAC.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGUAA
>K.viridogrisea.1 D13621.1/3-119
..UUCGGU.GG.U.G.UU.GGC....GG.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCACAUC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCU.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CU..G.CCGAAC
>K.albida.1 Z50736.1/3-119
..UUCGGU.GG.U.G.UU.GGC....GG.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCU.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CU..G.CCGAAC
>P.rugosa.1 Z50075.1/3-119
..UUCGGU.GG.U.G.AU.AGC....GG.U.A.G.G...GG..........U.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
AGG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>P.hydrocarbonoxydans.1 Z50058.1/3-119
..GUCGGU.GG.U.U.AU.GGC....GG.A.G.G.G...GG..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...CUGU
CAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGACA
>P.compacta.1 Z50056.1/3-119
..GUCGGU.GG.U.C.AU.GGC....GG.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
CAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGACA
>P.halophobica.1 Z50057.1/2-118
..GUCGGU.GG.U.C.AU.UGC....GG.A.G.G.G...GG..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGC
CAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGACA
>P.thermophila.1 Z50073.1/3-119
..GUCGGU.GG.U.U.AU.GGC....GG.A.G.U.G...GG..........A.AC.G...
.......C..CCG....G.UC....CCAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CACUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGC
UAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGACA
>Saccharomonospora.1 Z50066.1/3-119
..UUCGGU.GG.U.A.AU.AGC....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCACCA.G.C..G...CC..GAUG....GUACUGCAC...CCGC
CGG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>S.azurea.1 Z50062.1/3-119
..UUCGGU.GG.U.U.AU.AGC....GG.U.G.G.G...GA..........C.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCACCA.G.C..G...CC..GAUG....GUACUGCAC...UCGA
AGG.A.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>S.cyanea.1 Z50065.1/3-120
..UUCGGU.GG.U.C.AC.AGC....GG.UAG.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCACCA.G.C..G...CC..GAUG....GUACUGCAC...CCGA
AGG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>S.hordei.1 Z50067.1/4-120
..GUCGGU.GG.C.G.AU.AGC....GG.G.G.A.G...GG..........U.CC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GU.AGCUAA.G..
...............CUCCCCA.G.C..G...CU..GAUG....GUACUGCAC...UCGG
UAG.G.GUGUG.GGA...G...AGUA....AG.A.C.A.CC..G.CCGACA
>S.gregorii.1 Z50077.1/4-121
..GUCGGU.GG.U.U.UU.AGC....GG.A.GCG.G...GG..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGA
UAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGACA
>S.erythraea.1 Z50054.1/4-120
..GUCGGU.GG.C.G.AU.AGC....GG.U.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCUUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUG....GUACUGUAC...UCGA
UAG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGACA
>S.rectivirgula.1 Z50076.1/4-120
..GUCGGU.GG.C.G.AC.AGC....GG.G.G.A.G...GG..........U.CC.G...
.......C..CCG....G.UC....CCAUACC......GA.ACCCG.GA.AGCUAA.G..
...............CUCCCCA.G.C..G...CC..GAUG....GUACUGCAC...CCGG
UGG.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGACA
>S.hirsuta.1 Z50069.1/4-120
..GUCGGU.GG.C.G.AU.GGC....GG.G.G.A.G...GG..........U.CC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GU.AGCUAA.G..
...............CUCCCCA.G.C..G...CU..GAUG....GUACUGCAC...UCGA
CAG.G.GUGUG.GGA...G...AGUA....AG.A.C.A.CC..G.CCGACA
>S.nodosus.1 AF114035.1/6057-6173
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCAGA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.griseus.1 M59345.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.lividans.1 X58874.1/548-664
..UUCGGU.GG.U.C.AU.AGC....GU.A.G.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUUC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.ambofaciens.1 M27245.1/5773-5889
..UUCGGU.GG.U.C.AU.AGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.brasiliensis.1 X55269.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>S.nodosus.2 AF114034.1/6052-6168
..UUCGGU.GG.U.C.AU.ACC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCAUA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>Streptomyces.1 M59338.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>Streptomyces.2 M59335.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUCCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.rimosus.1 X59479.1/518-634
..UUCGGU.GG.U.C.AU.AGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUUC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.diastaticus.1 M59346.1/3-119
..UUCGGU.GG.U.C.AU.UGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.roseoverticillatus.1 X55253.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCG.A.C..G...CC..GAUG....GUACUGCA...UGGGG
GAC.C.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.cinereus.1 M59340.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGAAC
>S.purpureus.1 X55268.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAGC
>S.griseus.2 M76388.1/6142-6258
..UUCGGU.GG.U.C.AU.UGC....GU.U.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUUCA.G.C..G...CC..GAUG....GUACUUCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.nodosus.3 AF114033.1/6078-6194
..UUCGGU.GG.U.C.AU.AGC....AU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCAUA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.nodosus.4 AF114036.1/6058-6174
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCAGA.G.C..G...CC..CAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>Streptomyces.3 M59339.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUACC......GA.ACCCG.GA.AGCUAA.G..
...............CCUCACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>S.griseus.3 V01347.1/3-119
..UUCGGU.GG.U.C.AU.AGC....GU.G.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUUACA.G.C..G...CC..GAUG....GUACUGCAG...GGGG
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGAAC
>N.dassonvillei.1 D13617.1/2-117
..UGUGGU.GG.U.U.AU.UGC....UG.G.A.G.G...GU..........C.AC.A...
.......C..CCG....G.UC....UCUUUCC......GA.ACCCG.GU.CGUUAA.G..
...............UCUCUUU.G.C..G...CU..GAUG....GUACUGCC....CUGU
GGU.G.GGGUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCACGG
>H.cretacea.1 D13622.1/3-119
..UACGGC.GG.U.U.AU.GGC....GG.A.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUGCAC...CGGG
GAC.G.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>M.glauca.1 D13616.1/3-119
..UACGGC.GG.U.U.AU.AGC....GG.U.A.G.G...GA..........A.AC.A...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CCUUCCA.G.C..G...CC..GAUG....GUACUGCAC...UGGG
GAC.G.GUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGAA
>P.longispora.1 D13618.1/3-119
..UACGGC.GG.U.U.AU.AGC....GG.A.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUACUGCAC...UCGG
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGGAC
>S.roseum.1 D13620.1/3-119
..UACGGC.GG.U.U.AU.GGC....GA.A.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UU....ACAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUACUGCAC...CGGG
GAC.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGGAC
>A.madurae.1 D13615.1/3-119
..UUCGGU.GG.U.U.UU.GGC....GA.G.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CCUCUCA.G.C..G...CC..GAUG....GUACUGCA...UGGGA
GAC.U.GUGUG.GGA...G...AGUA....GG.A.C.A.CC..G.CCGGAC
>T.chromogena.1 AF116561.1/5902-6018
..UUCGGU.GG.U.U.AU.AGC....GG.U.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GU.AGUUAA.G..
...............CCCGCCA.G.C..G...CC..GAUG....GUACUGCAC...UGGU
GAC.G.GUGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCGGAC
>D.wimpennyi.1 AY704408.1/197-314
..UCUGGU.GC.C.G.AU.GCGC...UU.A.G.G.G...GA..........G.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.AU.GGUUAA.G..
...............ACUUAAG.C.G..G...CC..GAUG....GUACUAUGC...UGGA
GAC.G.GCAUG.GGA...G...AGCA....GG.U.G.G.GU..G.CCAGAU
>Flexibacter.1 M33889.1/1-117
..UCUGGU.GA.C.G.AU.GGC....GG.A.G.G.G...GA..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GC.CGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUUGCC...CCGC
AGG.G.AGCCG.GGA...G...AGUA....GG.A.C.G.UU..G.CCAGGU
>E.brevis.1 M33888.1/3-119
..UACGGC.GG.C.C.AU.AGC....GG.C.A.G.G...GA..........A.AC.G...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCCA.G.C..G...CC..GAUG....GUACUGCAC...UCGU
GAG.G.GUGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCGAAC
>F.hydatis.1 M33887.1/1-111
..UAAGGU.GG.U.U.AU.UGC....GG.C.G.G.G...GC..........U.CG.A...
.......C..CUC....U.UC....CCAUCCC......GA.ACAGA.GU.AGUUAA.G..
...............CCCGCCU.G.C..G...CA..GAUG....GUACUGCAG..U....
UA.....UGUG.GGA...G...AGUA....UG.U.C.G.UC..G.CCUUUC
>F.johnsoniae.1 M33886.1/1-116
..UCUGGU.GG.C.G.AU.AGC....AG.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............UUCUCUA.G.C..G...CC..GAUG....GUAGUGUGG...AC.U
UUG.U.CCCUG.UGA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>S.grandis.1 M33890.1/5-120
...UCGGU.GG.C.CUAU.AGC....AG.C.A.G.G...GA..........A..C.G...
.......C..CCG....G.AC....CCAUUCC......GA.ACCCG.GA.AGCUAA.G..
...............CCUGCUA.A.C..G...CU..GAUG....GUACUGCAA...CCGG
GAG.G.UUGUG.GGA...G...AGUA....AG.A.A.A.CC..G.CCGACA
>C.phaeobacteroides.1 M33892.1/2-110
..UACGGC.GA.C.U.UU.UUC....CC.A.G.G.U...GA..........U..C.A...
.......C..CUC....U.UC....CCAUUCC......GA.ACAGA.GU.CGUUAA.G..
...............CCCUGGA.G.A..G...CC..GAUG....GUACUGCUU..C....
.A....CUGCG.GGA...G...AGUA....GG.U.C.G.UC..G.CCG.AU
>C.limicola.1 M33893.1/2-111
..CACGGC.GA.C.U.AU.AUC....CC.U.G.G.U...GU..........U..C.A...
.......C..CUC....U.UC....CCAUUCC......GA.ACAGA.GU.CGUUAA.G..
...............CCCAGGA.G.A..G...CC..GAUG....GUACUGCUU..U....
.A....UUGCG.GGA...G...AGUA....GG.U.C.G.UC..G.CCGAGU
>P.aestuarii.1 M33894.1/2-109
..UACGGC.GA.U.U.AU.AUC....CC.A.G.G.U...GU..........U..C.A...
.......C..CUC....U.UC....CCAUUUC......GA.ACAGA.GU.CGUUAA.G..
...............CCCUGGU.G.A..G...CC..GAUG....GUACU.......GCGU
UAG.C.G.....GGA...G...AGUA....GG.U.C.G.UC..G.CCGUAU
>H.aurantiacus.1 M35310.1/1-117
..UCCGGU.GG.C.A.AU.GUC....GG.A.G.G.G...GU..........C.CC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCCUCCA.G.A..G...CC..GAUG....GUACUCCGC...GGGG
AAC.C.GCGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCGGAU
>T.roseum.1 M33891.1/4-123
..GCGCGU.GGCC.G.AG.AGC....GG.U.G.U.G...GC..........A.AC.A...
.......C..CCC....G.CU....CCAUCCC......GA.ACCGG.GU.CGUGCC.C..
...............CACACCA.G.C..G...CC..GGAGA...GUACUGCGC...GGGC
AAC.C.GCGUG.GGA...G...GCGA....GG.C.C.GCUC..G.CGCGCA
>S.lividus.1 X02731.1/3-119
..CCUAGU.GU.U.U.AU.GGC....GC.G.G.U.G...GA..........A.CC.A...
.......CG.CUG....A.UC.....CAUCCC......GA.ACUCA.GA.GGUGAA.A..
...............CAUCGCA.G.C..G...GU..GAAGA....UAGUUGGA...GGGU
AGC.C.UCCUG.CAA...A...AAUA....GC.U.C.A.AU..G.CUAGGC
>Synechococcus_elonga.1 X00757.1/2-119
..CCUGGU.GU.C.U.AU.GGC....GG.U.A.U.G...GA..........A.CC.A...
.......CU.CUG....A.CC....CCAUCCC......GA.ACUCA.GU.UGUGAA.A..
...............CAUACCU.G.C..G...GC..AACGA....UAGCUCCC...GGGU
AGC.C.GGUCG.CUA...A...AAUA....GC.U.C.G.AC..G.CCAGGU
>S.lividus.2 M10364.1/2-118
..CCUGGU.GG.U.G.AU.GGC....GA.U.G.U.G...GA..........C.CC.A...
.......CA.CUC....A.UC.....CAUCCC......GA.ACUGA.GU.GGUGAA.A..
...............CGCAUUU.G.C..G...GC..GACGA....UAGUUGGA...GGGU
AGC.C.UCCUG.UCA...A...AAUA....GC.U.A.A.CC..G.CCAGGG
>Tolypothrix.1 AF135389.2/2013-1896
..CCUGGU.GU.C.U.AU.UGC....GC.U.G.U.G...GA..........A.CC.A...
.......CA.CUG....A.CU....CCAUCCC......GA.ACUCA.GA.GGUGAA.A..
...............CGCUGCU.G.C..G...GC..CACGA....UAGUCUAG...GGGU
UGC.C.CUACG.CCA...C...AAUA....GC.U.C.G.AU..G.CCAGGU
>Prochloron.1 X02637.1/3-120
..CCUGGU.GU.C.U.CU.AGC....GC.U.U.U.G...GA..........A.CC.A...
.......CU.UCG....A.UU....CCAUCCC......GA.ACUCG.AU.UGUGAA.A..
...............CUUUGCU.G.C..G...GC..UAAGA....UACUUGC...UGGGU
UGC.U.GGCUG.GGA...A...AAUA....GC.U.C.G.AU..G.CCAGGA
>D.radiophilus.1 X52299.1/5-122
..CCCCGU.GC.C.G.UG.AGC....GC.C.U.C.G...GA..........A.CC.A...
.......C..CCC....A.CU....CCAUGCC......GA.ACUGG.GU.CGUGAA.A..
...............CGUGGCA.G.C..G...CC..UAUGA....UACUUGGA...CCGC
AGG.G.UCCUG.GGA...A...AGUC....GG.UGC.A.GU..G.CGGGGG
>D.radiodurans.1 X52300.1/5-122
..CCCCGU.GC.C.U.UU.AGC....GC.C.U.C.G...GA..........A.CC.A...
.......C..CCC....A.CU....CCAUGCC......GA.ACUGG.GU.CGUGAA.A..
...............CGUGGCA.G.C..G...CC..UAUGA....UACUUGGA...CCGC
AGG.G.UCCUG.GAA...A...AGUC....GG.UGC.A.GU..G.CGGGGG
>T.aquaticus.1 X01590.1/5-121
..CCCCGU.GC.C.C.UU.AGC....GG.C.G.U.G...GA..........A.CC.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.GA.AGUGAA.A..
...............CGCGCCA.G.C..G...CC..GAUG....GUACUGGGA...CCGC
AGG.G.UCCUG.GGA...G...AGUA....GG.U.C.G.GU..G.CGGGGG
>Thermus.1 M16532.1/2-117
..UCGGAC.CA.C.C.AU.ACC....GG.G.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UC....CCAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CCCCCCA.G.G..G...CC..GAUGA....UAGCCUCG..CCC.C
GA..G.CGAGG.UGA...A...AGUA....GG.U.C.G.UG..G.UCCGGG
>Thermus.2 M16531.1/2-121
..CCUCGG.GA.C.C.AU.AGC....GG.A.G.G.G...GA..........A.AC.A...
.......C..CCG....G.UUU...CCAUUCC......GA.ACCCG.GC.AGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUGA....UACUGUGC..CGGGC
GAA.CGGCACG.GGA...A...AGUA....GG.U.C.G.UC..C.CGGGGG
>A.xylanus.1 X13662.1/1-116
..CUUCGU.GA.C.A.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUACC......GA.ACACA.GA.AGUCAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUUGGG...GGUU
UUC.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UC..G.CUAAG.
>B.subtilis.1 K01389.1/140-255
..UCUGGU.GA.U.G.AU.GGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUCGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>B.methanolicus.1 Z11818.1/3-116
....UGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.GGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>B.methanolicus.2 Z11825.1/3-116
....UGGU.GG.C.G.UU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.methanolicus.3 Z11819.1/3-116
....UGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.GGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.YGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.methanolicus.4 Z11822.1/1-116
..CCUGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GA..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.megaterium.1 X02023.1/1-116
..UCUGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUUA.G.C..G...CC..GAUG....GUAGUUGGG...AC.U
UUG.U.CCCUG.UGA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>B.methanolicus.5 Z11820.1/5-112
......GU.GG.A.U.UA.GGC....GA.A.G.A.G...GU..........U.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACA.GC.CGAGAA.A..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUUGG....GGGU
CUC.C.CCCUG.UGA...G...AGCA....GG.A.C.G.CC..G.CU....
>B.methanolicus.6 Z11816.1/1-116
..CCUGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.firmus.1 X02025.1/1-116
..UCUGGU.GG.C.G.AU.AGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUAG....GGGC
UGU.C.CCCUG.UGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.subtilis.2 AF008220.1/5185-5300
..UUUGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUCGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.CC..G.CCAAGC
>Bacillus.1 K03155.1/22-137
..UUUGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUCGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.CC..G.CCAAGC
>B.methanolicus.7 Z11821.1/3-116
....UGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>B.licheniformis.1 X02013.1/1-116
..UUUGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUUGG....GGGC
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.CC..G.CCAAGC
>B.subtilis.3 X05525.1/1-116
..UUUGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GU.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUGAGUGG....GGGC
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.CC..G.CCAAGC
>B.methanolicus.8 Z11824.1/3-116
....UGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.GGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCAGGC
>B.methanolicus.9 Z11823.1/1-116
..CCUGGU.GG.C.G.AU.GGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUUCUCA.G.C..G...CC..GAUG....GUAGUUGGG...GC.A
UUG.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>B.amyloliquefaciens.1 X01589.1/1-117
..UCUGGU.GA.C.U.AU.AGC....GG.A.G.G.G...GC..........A.AC.A...
.......C..CCG....U.AC....CCAUCCC......GA.ACACG.GA.CGUGAA.G..
...............ACCUCCA.G.C..G...CC..GAGAA....UACUGGGA...GGGC
AGC.C.UCCUG.GGA...A...AGUA....GG.U.C.G.UU..G.CCAGGC
>G.stearothermophilus.1 AJ251080.1/1-117
..CCUAGU.GG.U.G.AU.AGC....GG.A.G.G.G...GA..........A.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUAGUUGGG...GCCA
GCG.C.CCCUG.CAA...G...AGUA....GG.U.C.G.CU..G.CUAGGC
>G.stearothermophilus.2 M10816.1/1-117
..CCUAGU.GA.C.A.AU.AGC....GG.A.G.A.G...GA..........A.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUCCA.G.C..G...CC..GAUG....GUAGUUGGG...GCCA
GCG.C.CCCUG.CAA...G...AGUA....GG.U.C.G.UU..G.CUAGGC
>B.brevis.1 X02028.1/1-117
..UCUGGU.GA.U.G.AU.GGC....GG.A.G.G.G...GA..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GC.CGUUAA.G..
...............CCCUCCA.G.C..G...CC..AAUG....GUACUUGC...UCCGC
AGG.G.AGCCG.GGA...G...AGUA....GG.A.C.G.UC..G.CCAGGC
>P.popilliae.1 AY245251.1/371-487
..UUUGGC.GA.C.U.AU.GGC....GG.A.G.G.G...GU..........U.CC.A...
.......C..GCG....U.UC....CCAUCUC......GA.ACACG.AC.CGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUUGGA...CCGC
AGG.G.UCCUG.GGA...G...AGCA....GG.A.C.G.UU..G.CCAAGC
>P.kocurii.1 X13006.1/1-116
..UCCAGU.GA.U.G.AU.GGC....AA.A.G.A.G...GC..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GC.AGUUAA.G..
...............CUCUUUU.G.C..G...CC..GAUG....GUAGUUGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.UC..G.CUGGGC
>P.citreus.1 X13005.1/1-116
..UCCAGU.GA.U.G.AU.GGC....AA.A.G.A.G...GC..........C.AC.A...
.......C..CCG....U.UC....CCAUGCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUUU.G.C..G...CC..GAUG....GUAGUUGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....GG.A.C.G.UC..G.CUGGGC
>S.ureae.1 X13007.1/1-116
..UUUAGU.AA.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CU..GAUG....GUAGUUGG....GGGU
UUC.C.CCCUG.UGA...G...AGUA....AG.A.C.G.UU..G.CUAGGC
>S.pasteurii.1 X02024.1/3-117
....UGGU.GG.C.G.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUAGUUGGG...GUGU
UAG.C.CCCUG.CAA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>S.inulinus.1 X12884.1/1-117
..CUUGGC.GG.U.C.AU.AGC....GA.A.G.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GU.CGUUAA.G..
...............CUCUUCU.G.U..G...CC..GAAG....GUAAUUGGG...GGCU
GUC.C.CCCUG.UGA...G...AGUA....GG.U.C.A.CU..G.CCAGGC
>S.epidermidis.1 K02688.1/1-115
..UCUGGU.GA.U.A.AU.GGC....AA.G.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUCCUUA.G.C..G...CC..GAUG....GUAGUCGG....ACUU
ACG.U.UCCG..CUA...G...AGUA....GG.A.C.G.UU..G.CCAGGC
>S.aureus.1 K02687.1/1-115
..UCUGGU.GA.C.U.AU.AGC....AA.G.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUCCUUA.G.C..G...UC..GAUG....GUAGUCGA....ACUU
ACG.U.UCCG..CUA...G...AGUA....GA.A.C.G.UU..G.CCAGGC
>T.vulgaris.1 X55252.1/1-115
..UCUGGU.GA.C.C.AU.AGC....GG.A.G.G.G...GA..........U.CC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCCUCCA.G.C..G...CC..GAUG....GUACUUGG....GGAU
GAC.C..CCUG.GGA...G...AGUA....GG.U.C.G.UU..G.CCAGGC
>C.tyrobutyricum.1 M58416.1/2-116
...CAGGU.GG.C.G.AU.GGC....GG.A.A.A.G...GU..........C.AC.A...
.......C..CCG....A.AC....ACAUCCC......GA.ACUCG.GA.AGUUAA.G..
...............CUUUCCA.G.C..G...CC..GAUG....GUAGUUGG....GGGU
UUC.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCGGGC
>C.perfringens.1 AB045287.1/5831-5948
..UCUGGU.GA.U.G.AU.GUUC...UU.U.A.G.G...GU..........A.AC.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.AC.GGUUAA.G..
...............CCUUUAG.A.A..G...CC..GAUG....GUACUGCAC...GGGA
GAC.U.GUGUG.GGA...G...AGUA....GG.U.G.G.UC..G.CCAGGU
>C.butyricum.1 M36155.1/1-117
..UCUGGU.GA.U.G.AU.GGC....AU.A.G.A.G...GU..........A.AC.A...
.......C..UCC....U.UC....CCAUUCC......GA.ACAGG.AC.AGUUAA.G..
...............GUCUAUA.G.C..G...CC..GAUG....GUACUGCA...UGGGA
GAC.U.GUGUG.GAA...G...AGUA....GG.A.C.G.UC..G.CCAGGU
>C.carnis.1 X13663.1/1-117
..CCUAGU.GA.U.G.AU.GGC....GU.A.G.A.G...GA..........A.AC.A...
.......C..UCC....U.UU....CCAUUCC......GA.ACAGG.AC.AGUUAA.G..
...............CUCUACA.G.C..G...UC..GAUG....GUACUGCAC...GGGU
GAC.U.GUGUG.GGA...G...AGUA....GA.A.C.G.UU..G.CUAGGU
>C.bifermentans.1 M36152.1/2-117
...GUGGU.UA.U.U.AC.AGC....AA.A.G.A.G...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUUCC......GA.ACACA.GA.AGUUAA.G..
...............CUCUUUA.G.C..G...CC..GAUG....GUACUUGG...UGGGA
AGC.U.GCCUG.GGA...G...AGUA....GG.A.C.G.UA..G.CCGCGU
>C.pasteurianum.1 X01942.1/1-117
..UCCAGU.GU.C.U.AU.GAC....UU.A.G.A.G...GU..........A.AC.A...
.......C..UCC....U.UC....CCAUUCC......GA.ACAGG.CA.GGUUAA.G..
...............CUCUAAU.G.U..G...CU..GAUG....GUACUGCAG...GGGA
AGC.C.CUGU..GGA...G..AAGUA....GG.U.C.G.AC..G.CUGGGU
>C.tyrobutyricum.2 M36159.1/2-116
...CAGGU.GG.U.G.AU.GGC....GG.A.A.A.G...GU..........C.AC.A...
.......C..CCG....A.AC....ACAUCCC......GA.ACUCG.GA.AGUUAA.G..
...............CUUUCCA.G.C..G...CC..GAUG....GUAGUUGG....GGGU
UUC.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UU..G.CCGGGC
>C.tyrobutyricum.3 M36156.1/2-116
...CAGGU.GG.C.G.AU.GGC....GG.A.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUUUCCA.G.C..G...CC..GAUG....GUAGUUGG....GGGU
CUC.C.CCCUG.CGA...G...AGUA....GG.A.C.G.UU..G.CCGGGC
>C.butyricum.2 M36154.1/1-117
..UCUGGU.GA.U.G.AU.GGC....AU.A.G.A.G...GU..........A.AC.A...
.......C..UCC....U.UU....CCAUUCC......GA.ACAGG.AC.AGUUAA.G..
...............GUCUAUA.G.C..G...CC..GAUG....GUACUGCA...UGGGA
GAC.U.GUGUG.GAA...G...AGUA....GG.A.C.G.UC..G.CCAGGU
>C.tyrobutyricum.4 M36157.1/2-116
...CAGGU.GG.C.G.AU.GGC....GG.A.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUUUCCA.G.C..G...CC..GAUG....GUAGUUGG....GGGU
CUC.C.CCCUG.CGA...G...AGUA....GG.A.C.G.CU..G.CCGGGC
>F.magna.1 AB109769.1/5352-5468
..UAUGGU.GA.U.A.AA.AGC....AA.G.A.G.G...GA..........U.AC.A...
.......C..CUG....U.AC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CCUCUUA.A.C..G...CC..GAUG....GUACUACGA...UGGA
AAC.G.UCGUG.GGA...G...AGUA....GG.U.A.G.UC..G.CCAAAC
>E.rhusiopathiae.1 AB019247.1/4143-4256
..UCUGGU.GA.U.U.UU.AGC....GA.A.G.U.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUCUC......GA.ACACA.GA.AGUUAA.G..
...............CACUUUA.G.C..G...GC..GACAA....UAUCUAGC..CAC..
..G.C.GCUAG.UGA...A...GAUA....GU.U.C.A.UC..G.CCAGGU
>E.faecalis.1 X02027.1/1-117
..UGUGGU.GG.C.G.AU.AGC....GA.G.A.A.G...GA..........U.AC.A...
.......C..CUG....U.AA....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUUCUUA.G.C..G...CC..GAUU....GUAGUGAGG...GGGU
UGC.C.CCUUG.UGA...G...AGUA....GG.A.C.G.UC..G.CCACGC
>L.plantarum.1 X12886.1/1-117
..UGUGGU.GA.C.G.AU.GGC....GA.G.A.A.G...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGUC......GA.ACACA.GA.AGUUAA.G..
...............CUUCUUA.G.C..G...CC..GAGA....GUAGUUGGG...GGAU
CGC.U.CCCUG.CGA...G...GGUA....GG.A.C.G.UU..G.CCAUGC
>L.delbrueckii.1 X15245.1/36-152
..UGCGGU.GG.C.A.AU.GGC....AA.G.A.A.G...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GU.AGUUAA.G..
...............CUUCUUA.A.C..G...CC..GAAA....GUAGUUGG...UGGGA
AAC.U.GCCUG.CGA...G...GAUA....GG.A.A.G.CU..G.CCGCGC
>L.delbrueckii.2 X15246.1/11-127
..UGCGGU.GG.C.A.AU.GGC....AA.U.A.A.G...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GU.AGUUAA.G..
...............CUUCUUA.A.C..G...CC..GAAA....GUAGUUGG...UGGGA
AAC.U.GCCUG.CGA...G...GAUA....GG.A.A.G.CU..G.CCGCGC
>L.brevis.1 X02026.1/1-117
..UGUGGU.GG.C.G.AU.AGC....CU.G.A.A.G...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUUCAGC.A.C..G...CC..GAUA....GUAGUUGGG...GGAU
CGC.C.CCCUG.CGA...G...GAUA....GG.A.C.G.UU..G.CCACGC
>O.oeni.1 AJ510153.1/1-116
..UGUCGU.GU.U.A.AU.UCC....GA.U.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUUCC......GA.ACACA.GA.AGUUAA.G..
...............CUUGUCA.G.G..G...CC..CAAA....GUAGUUACA...GGAA
CGC.C.UGUUG.CAA...G...GUUA....GG.A.C.G.AC..G.CGAUG.
>L.lactis.1 X75364.1/777-892
..UUUGGU.AU.U.U.AU.UGC....AU.A.G.G.A...GA..........U.AU.A...
.......C..CUG....U.UC....CCAUGUC......GA.ACACA.GA.AGUCAA.G..
...............UCCUUUU.G.C..G...CU..GGAA....GUACUUGG....GGGU
UGC.C.CCCUG.GGA...G...AUAA....AG.A.C.G.AU..G.CCAAGU
>L.lactis.2 X00081.1/2-117
..UUUGGU.CA.U.C.AU.UGC....GA.U.G.G.A...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGUC......GA.ACACA.GA.AGUUAA.G..
...............UCCAUCU.A.C..G...GC..GGAA....GUACUUGG....GGGU
UGC.C.CCCUG.GGA...G...AUAU....GC.G.A.G.UG..G.CCAAGU
>S.salivarius.1 S43413.1/98-213
..UUAAGU.GA.C.G.AU.AGC....CU.A.G.G.A...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CCCUAGU.A.C..G...CC..UGAU....GUAGUUGG....GGGU
UGC.C.CCCUG.UUA...G...AUAC....GG.U.A.G.UC..G.CUUAGC
>W.viridescens.1 X01950.1/1-117
..UGUUGU.GA.U.G.AU.GGC....AU.U.G.A.G...GC..........C.AC.A...
.......C..CUG....U.UC....CCAUACC......GA.ACACA.GA.AGUUAA.G..
...............CUCAAUA.G.C..A...CC..GAAA....GUAGUUGGA...GGAU
CUC.U.UCCUG.CGA...G...GAUA....GG.A.C.G.UC..G.CGAUGC
>W.viridescens.2 X02713.1/1-117
..UGUUGU.GA.U.G.AU.GGC....AU.U.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUACC......GA.ACACA.GA.AGUUAA.G..
...............CUCAAUA.G.C..G...CC..GAAA....GUAGUUGGA...GGAU
CUC.U.UCCUG.CGA...G...GAUA....GG.A.C.G.UC..G.CAAUGC
>B.marina.1 M35164.1/2-109
..UCCGGU.GA.C.C.AU.AUC....GA.A.A.A.G...GU..........C.AU.A...
.......C..CUG....U.UC....CCAUUCC......GA.ACACA.GC.CGUCAA.G..
...............CUUUU.C.G.A..G...CC..GAUGAUA.GUACCACAA..G....
.........UG.UGA...A...AGUA....GG.U...A.UC..G.CCGGAU
>G.obscuriglobus.1 M35170.1/2-108
..UCCGGU.GA.C.C.AU.ACC....CA.A.A.C.G...GA..........A.AC.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.GC.CGUGAA.A..
................GUUUGA.G.G......CC..GAUG....GUA........GUGCG
UCC.A.GCGCG...A...G...AGUA....GG.U...A.UC..G.CCGGCC
>I.pallida.1 M35169.1/2-109
..UCCGGU.GA.C.C.AU.ACC....GU.C.G.G.G...GU..........C.CU.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.GC.CGUCAA.G..
...............CCCG.CC.G.G..G...CC..UAUGA....UAGU.......GCGU
CAG.C.G.....CGA...A...AGUC....GG.U.G.A.UC..G.CCGGAU
>Pirellula.1 M35166.1/2-110
..UCCGGU.GA.C.C.AU.AUG....GU.U.G.U.G...GA..........A.AC.A...
.......C..CUG....U.UC....CCUUUCC......GA.ACACA.GC.AGUUAA.G..
...............CACAA.C.C.A..G...CC..GAUGA....UA.........GUGC
CCA.C.CAGUG.CGA...A...AGUA....GG.U...A.UC..G.CCGGAU
>Pirellula.2 M35165.1/2-110
..UCCGGC.GA.U.C.AU.AUC....UU.A.A.A.G...GU..........U.AU.A...
.......C..CUG....U.UC....CCAUUCC......GA.ACACA.GC.AGUCAA.G..
...............CUUUA.A.G.A..G...CC..GAUGA....UA.........GUGC
CCA.C.CAGCG.UGA...A...AGUA....GG.U...C.UU..G.CCGGAU
>P.limnophilus.1 M35167.1/2-111
..UCCGGU.GA.C.U.UU.ACG....CG.U.G.A.G...GA..........A.AC.A...
.......C..UCG....U.UC....CCAUUCC......GA.ACACG.AC.AGUUAA.G..
...............CUC.CCG.C.G..G...CC..GAUGA....UA.........GUGC
CCA.C.CAGCG.UGA...A...AGUA....GG.U.U.A.UC..G.CCGGAC
>P.brasiliensis.1 M35168.1/2-110
..UCUGGU.GA.C.U.UU.ACG....UC.U.G.G.G...GA..........A.AC.A...
.......C..UCG....U.UC....CCAUUCC......GA.ACACG.AC.AGUUAA.G..
...............CCCUG.A.C.G..G...CC..GAUGAUA.GUACUGCAA..G....
.........UG.UGA...A...AGUA....GG.U.G.A.UU..G.CCAGAC
>V.adaptatus.1 X16191.1/4-119
..CUUGGU.GG.C.U.AU.AGC....GU.C.U.G.U...GA..........C.CC.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUGAA.A..
...............CCGGACU.G.C..G...CC..GAUG....GUACUAGUG...CU.U
CAA.G.CACUG.GAA...G...AGUA....GG.U.C.G.UC..G.CCAGGC
>V.cyclosites.1 X16192.1/3-117
..CCUGGU.GG.U.U.AU.GGC....GG.A.G.C.G...GC..........U.GC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCUCCA.G.C..G...CU..GAUG....GUACUUCG...UCU..
CAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGU
>C.spinosum.1 X06576.1/4-117
..CCUGGU.GG.C.U.AU.GCC....GG.G.G.G.U...UA..........C.CC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GU.CGUUAA.G..
...............UCCCCCU.G.G..G...CC..AAUG....GUACUUCG...UCU..
CAA.G.GCGCG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGG.
>B.quintana.1 L12404.1/3-117
..CUUGGU.GG.U.U.AU.GGC....GG.A.G.C.G...AA..........C.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............CGUUCCA.G.C..G...CU..GAUG....GUACUUUG....CCUC
AAG.G.CAC...GGC...A..GAGUA....AG.U.C.G.UU..G.CCAGGU
>B.bacilliformis.1 L08503.1/3-117
..CUUGGU.GG.U.U.AU.GGC....GG.A.A.C.G...CC..........U.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............CGUUCCA.G.C..G...CU..GAUG....GUACUUUG...UCU..
UAA.G.GCACG.GGA...G...AGUA....AG.U.C.G.CU..G.CCAGGU
>B.henselae.1 L12403.1/3-117
..CUUGGU.GG.U.U.AU.GGC....GG.A.G.U.G...AA..........C.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCUCCA.G.C..G...CU..GAUG....GUACUUUG....CCUC
AAG.G.CAC...GGC...A..GAGUA....AG.U.C.G.UU..G.CCAGGU
>B.japonicum.1 Z35330.1/6121-6235
..CCUGGU.GG.U.U.UU.AGC....GA.A.G.A.G...CC..........U.CA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCUUCA.G.C..G...CC..AAUG....GUACUAUG....GCUU
AAG.C..CCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGC
>N.winogradskyi.1 X06575.1/4-117
..CCUGGU.GG.U.U.CU.AGC....GA.G.G.A.G...CU..........U.GA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..AAUG....GUACCAUG....GCUU
AAG.C..CCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGG.
>R.palustris.1 X03903.1/4-117
..CCUGGU.GG.U.U.CU.AGC....GA.G.G.A.G...CC..........U.GA.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..AAUG....GUACUCCG...UCU..
CAA.G.ACGCG.GGA...G...AGUA....GG.U...G.CC..G.CCAGGC
>B.abortus.1 AF454951.1/1084-1198
..CCUGGU.GG.U.U.AU.GGC....GG.A.G.C.G...GC..........U.GC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCUCCA.G.C..G...CC..AAUG....GUACUUCG...UCU..
CAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGU
>B.abortus.2 L12402.1/3-117
..CCUGGU.GG.U.U.AU.GGC....GG.A.G.C.G...GC..........U.GC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCUCCA.G.C..G...CC..AAUG....GUACUUCG....UCUC
AAG.A.GGA...GGC...A..GAGUA....GG.U.C.G.AU..G.CCAGGU
>Hyphomicrobium.1 M34769.1/10-105
..........A.U.U.AU.GGC....GG.G.G.U.G...GC..........U.GC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCCCCU.G.C..G...CC..GAUG....GUACUUCG...UCU..
UAA.G.ACGCG.GGA...G...AGUA....GG...................
>H.vulgare.1 M34768.1/3-117
..CCUGGU.GA.U.U.AU.GGC....GG.G.U.G.G...UC..........U.GC.A...
.......C..CCG....A.UC....UCAUUCC......GA.ACUCG.GC.CGUGAA.A..
...............CCGCCCA.G.C..G...CC..AAUG....GUACUUCG...UCU..
UAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.UC..G.CCAGGU
>M.organophilum.1 M34770.1/1-114
..CC.GGC.GG.C.C.UG.AGC....GG.U.G.U.G...CC..........A.GA.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUUAA.A..
...............CACACCA.G.C..G...CC..CAUG....GUACUGUG....CU.C
CAA.G.ACACG.GGA...G...AGUC....GG.U.C.G.CC..G.CCAGGC
>Methylobacterium.1 X03902.1/1-114
...CUGGU.GG.C.C.UG.AGC....GG.U.G.U.G...CC..........C.AGAA...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUUAA.A..
...............CACACCA.G.C..G...CC..CAUG....GUACUGUG...UCU..
CAA.G.ACACG.GGA...G...AGUC....GG.U...G.CC..G.CCAGGC
>M.extorquens.1 M34771.1/2-116
..CCUGGC.GG.C.C.UG.AGC....GG.U.G.U.G...GA..........A.GA.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUUAA.A..
...............CACACCA.G.C..G...CC..GAUG....GUACUGUG...UCU..
CAA.G.ACACG.GGA...G...AGUC....GG.U.C.G.CC..G.CCAGGC
>M.parvus.1 M34764.1/3-118
..CUUGGU.GA.C.C.AU.AGC....GA.G.C.G.U...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUA.G.C..G...CC..GAUGA....UAGUGUGG..CCGUU
..U.G.CCAUG.CGA...A...AGUA....GG.G.C.A.UU..G.CMAAGC
>M.sporium.1 S39188.1/3-117
..CCUGGU.GG.C.U.UU.AGC....GA.A.G.C.G...AU..........C.AG.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUCAA.A..
...............CGCUCCA.G.C..G...CC..AAUG....GUACUAUG...UCU..
CAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.UC..G.CCAGGC
>M.trichosporium.1 M34763.1/3-117
..CUUGGU.GA.C.U.AU.AGU....GA.G.C.G.U...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUA.G.C..G...CC..GAUGA....UAGUGUGG..CCGUU
..U.G.CCAUG.CGA...A...AGUA....GG.G.C.A.UU..G.CMAAG.
>A.vitis.1 U28505.1/6807-6921
..CCUGGU.GG.U.C.AU.GGC....GG.G.G.C.G...GC..........C.GC.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.GC.CGUGAA.A..
...............CGCCCCU.G.C..G...CC..AAUG....GUACUUCG...UCU..
UAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGU
>A.tumefaciens.1 X02627.1/4-118
..CCUGGU.GG.U.C.AU.CGC....GG.G.G.C.G...GC..........U.GC.A...
.......C..CCG....U.UC....CCUUUCC......GA.ACACG.GC.CGUGAA.A..
...............CGCCCCA.G.C..G...CC..AAUG....GUACUUCG...UCU..
CAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGU
>A.vacuolatus.1 M34773.1/1-114
...CUGGU.GG.C.C.AU.UGC....GA.G.G.A.G...CC..........C.CA.A...
.......U..UCG....A.UC....UCACUCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..GAUG....GUACUAUG...UCU..
CAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGC
>A.aquaticus.1 M34775.1/1-115
..CCUGGU.GG.C.C.AU.UGC....GA.G.G.A.G...CC..........C.CA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..GAUG....GUACUAUG...UCU..
CAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGC
>S.novella.1 M11544.1/4-118
..CCUGGU.GG.C.C.AU.UGC....GA.G.G.A.G...CC..........U.GA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..GAUG....GUACUAUG...UCU..
UAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGC
>X.viscosus.1 M34774.1/2-116
..CCUGGU.GG.C.U.AU.GGC....GA.G.G.A.G...UC..........C.GA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..AAUG....GUACUUCG...UCU..
CAA.G.ACGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGC
>P.versutus.1 M11543.1/1-115
..UCUGGU.GG.C.U.UU.AGC....AC.G.A.G.C...AA..........A.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.G..
...............UGCCGUC.G.C..G...CC..AAUG....GUACUGCG....UCAA
AAG.A..CGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCAGAC
>P.denitrificans.1 X01501.1/2-116
..UCUGGU.GG.C.C.AA.AGC....AC.G.A.G.C...AA..........A.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.G..
...............UGCCGUA.G.C..G...CC..AAUG....GUACUGCG....UCAA
AAG.A..CGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCAGAC
>R.sphaeroides.1 X53853.1/5621-5735
..UCUGGU.GG.C.C.AU.AGC....AC.G.A.G.C...AA..........A.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.AGUUAA.G..
...............UGCCGUC.G.C..G...CC..AAUG....GUACUGCG...UCU..
CAA.G.ACGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGAC
>R.sphaeroides.2 X05520.1/1-114
...UUGGU.GG.C.C.AU.AGU....AC.G.A.G.U...AA..........A.AU.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.AGUUAA.G..
...............UGCCGUC.G.C..G...CC..AAUG....GUACUGCG...UCU..
GAA.G.ACGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGAC
>R.capsulatus.1 X04585.1/3-117
..UUUGGU.GG.U.C.AU.AGC....GU.U.G.G.C...UA..........A.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.G..
...............GGCCAAC.A.C..G...CC..GAUG....GUACUGCG...UCU..
CAA.G.ACGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCAAAC
>R.capsulatus.2 X03904.1/2-116
..UUUGGU.GG.U.C.AU.AGCG...AC.G.G.C.U...AA..........A..C.U...
.......C..CCG....A.UC....CCUUCCC......GA.ACUCG.GC.CGAUAA.G..
...............GGCCGUC.A.C..G...CC..AAUG....GUACUGCG...UCU..
CAA.G.ACGUG.GGA...G...AGUA....GG.U.C.A.CC..G.CCAAAC
>Acetobacter.1 M76575.1/4-118
..UCUGGU.GG.U.C.AU.AGC....GG.G.A.G.U...AA..........A.UC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUCAA.A..
...............UGCCUCA.G.C..G...CC..CAUGA....UACUCUG....CCUC
AAG.G.CAC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGAC
>Acetobacter.2 M76574.1/4-118
..UCUGGU.GG.C.C.AU.GGC....GG.C.A.G.C...AA..........A.UC.A...
.......C..CCG....A.UC....CCAUGCC......GA.ACUCG.GC.CGUCAA.A..
...............UGCCCCA.G.C..G...CC..CAUGA....UACUCUG....CCUC
AAG.G.CAC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGAU
>Acetobacter.3 M76580.1/4-118
..UCUGAU.GG.C.C.AU.GGC....GG.G.A.G.C...AA..........A.UC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUCAA.A..
...............UGCCCCA.G.C..G...CC..CAUGA....UACUCUG....CCUC
AAG.G.CAC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGAU
>Acetobacter.4 M76576.1/4-118
..UCUGAU.GA.C.C.AU.GGC....GG.G.A.G.C...AA..........A.UC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUCAA.A..
...............UGCCCCA.G.C..G...CC..CAUGA....UACUCUG....CCUC
AAG.G.CAC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGAU
>A.pasteurianus.1 M76569.1/4-118
..CCUGGU.GG.C.C.AU.GGC....GG.G.A.G.A...GA..........U.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............ACCCCCA.G.C..G...CC..UAUGA....UACGUUG....GCUU
AAG.C..CACG.GGA...A...AGUC....GG.U.C.G.CC..G.CCAGGU
>A.aceti.1 M76573.1/4-118
..CCUGGU.GG.C.U.AU.GGC....GG.G.A.G.A...GA..........U.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............ACCCCCA.G.C..G...CC..UAUGA....UACUGCG....GCUU
AAG.C..CGUG.GGA...A...AGUC....GG.U.C.G.CC..G.CCAGGU
>A.acidophilum.1 M11546.1/4-118
..CCUGGU.GG.C.C.AU.UGC....GG.G.G.G.G...CC..........C.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............ACCCCCA.G.C..G...CC..CAUG....GUACUGUG....CCUC
AAG.G..CACG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGGU
>A.cryptum.1 M11545.1/4-118
..CCUGGU.GG.C.C.AU.UGC....GG.G.G.A.G...CC..........U.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............AUCCCCA.G.C..G...CC..CAUG....GUACUGUG....CCUC
AAG.G..CACG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGGU
>A.methanolica.2 M76571.1/4-117
..UCUGGU.GG.C.C.AU.GGC....GG.G.A.G.C...AA..........A.UC.A...
.......G..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUCAA.A..
...............UGCCCCA.G.C..G...CC..CAUGA....UACUCUG....CCUC
AAG.G.CAC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGA.
>G.xylinus.1 M76572.1/4-118
..CCUGGU.GG.C.A.AU.GGC....GG.G.G.A.A...UA..........U.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............UGCCCCA.G.C..G...CC..CAUGA....UACUGUG....CCUU
AAG.G..CACG.GGA...A...AGUC....GG.U.C.G.CC..G.CCAGGU
>G.oxydans.1 M76579.1/4-118
..CCUGGU.GG.C.C.AU.UGC....GA.G.G.G.C...CC..........U.AC.A...
.......C..CCG....A.UC....CCUUCCC......GA.ACUCG.GC.CGUGAA.A..
...............UCCCUCA.G.C..G...CC..UAUGA....UACUGCA....CCUC
AAG.G.UGC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGGU
>G.oxydans.2 M76577.1/4-118
..CCUGGU.GG.C.C.AU.UGC....GA.G.G.G.C...CC..........U.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............UCCCUCA.G.C..G...CC..UAUGA....UACCGUA....CCUU
AAG.G.UGC...GGA...A..AAGUC....GG.U.C.G.CC..G.CCAGGU
>R.thiosulfatophilus.1 L37449.1/4-118
..GCUUGC.GC.U.C.GG.UGU....GU.A.G.U.G...UA..........C.AU.A...
.......C..CCG....A.UC....CCAUCCC......GA.GCUCG.GC.CGUGAA.A..
...............CACUCCA.G.C..G...CC..UAUU....GUACCGAG....GCUU
AAG.C.GGCG..GGA...G...AGUC....GG.U.C.A.GC..G.CCAGGG
>S.humosa.1 X06577.1/4-117
..CCUGGU.GG.C.C.CA.AGU....GA.G.G.G.G...GC..........U.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............ACCCUCA.G.C..G...CC..GAUG....GUACUGCG....UCUU
AAG.G.CGC...GGA...A..GAGUA....GG.U.C.G.CC..G.CCAGG.
>A.lipoferum.1 X75615.1/8-118
..AGUGAU.GA.G.U.AU.GGC....AA.A.G.A.G...GU..........C.A..A...
.......C..CCG....U.UC.....CAUACC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUUA.G.C..G...CC..GAUG....GUAGUUGG....GGGC
UUC.C.CCCUG.UGA...G...AGUA....GG.A......C..G.UCGCUA
>R.rubrum.1 X02044.1/4-118
..CCUGGU.GG.U.C.AU.UGC....GG.G.C.U.C...GA..........A.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............GAGCCCU.G.C..G...CC..AAUG....GUACUGCG...UCU..
UAA.G.GCGUG.GGA...G...AGUA....GG.U.C.G.CC..G.CCAGGC
>A.phagocytophilum.1 AF416766.1/2880-2994
..GCUGGU.GG.U.A.AU.GGC....AG.G.A.G.U...GA..........A.AC.A...
.......C..CCG....G.UA....ACAUUCC......GA.ACCCG.GA.AGUUAA.G..
...............CCUCCUA.G.C..G...CC..UGUG....GUACUUUG...UCU..
UAA.G.ACAUG.GGA...G...AGAG....GG.U.C.G.CU..G.CCAGCC
>E.chaffeensis.1 AF416765.1/2878-2993
..GUUGGU.GG.U.A.AU.AGC....GG.A.A.G.U...GG..........U.AC.A...
.......C..CCA....GCUU....ACAUUUC......GA.ACCUG.GA.AGUUAA.G..
...............CCUUCUA.G.C..G...CU..GAUG....GUACUUUG...UCU..
UAA.G.ACAUG.GGA...G...AGUA....AG.U.C.A.CU..G.CCACCC
>W.endosymbiont.1 AF051554.1/130-236
..CUUGGU.GG.C.U.AU.AGC....AA.A.A.A.U...GA..........A.CC.A...
.......C..CCG....A.UC....UCAUUUC......GA.ACUCG.GA.AGUGAA.A..
...............CUUUUUA.G.C..G...CC..GAUGA....UACUUAAA..A....
.........AG.GGA...A...AGUA....GG.U.C.G.UU..G.CCAAGU
>W.endosymbiont.2 AF051555.1/130-236
..CUUGGU.GG.C.U.AU.AGC....AA.A.A.A.U...GA..........A.CC.A...
.......C..CCG....A.UC....UCAUUUC......GA.ACUCG.GA.AGUGAA.A..
...............CUUUUUA.G.C..G...CC..GAUGA....UACUUAAA..A....
.........AG.GGA...A...AGUA....GG.U.C.G.UC..G.CCAAGU
>R.prowazekii.1 AJ235270.1/260875-260989
..CUUGGU.GG.U.C.AU.AGC....AU.G.A.G.U...GA..........A.AC.A...
.......C..ACG....A.UC....CCAUCCC......GA.ACUCG.AA.CGUGAA.A..
...............CCUCAUA.G.C..G...CU..AAUG....GUACUAUG....UCAU
AAG...CCAUG.GGA...G...AGUA....AG.U.C.G.CU..G.CCAAGC
>E.longus.1 X03905.1/4-117
..CUUGGU.GG.U.C.CU.AGC....GA.C.U.G.U...GA..........C.CC.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUGAA.A..
...............CCAGUUA.G.C..G...CC..GAUG....GUACUAUG...UCU..
UAA.G.GCAUG.GAA...G...AGUA....GG.U...G.CC..G.CCAGGC
>E.ramosum.1 L37446.1/4-117
..CUUGGC.CU.C.G.AU.AGU....GC.G.U.C.G...UA..........C.CC.A...
.......C..GCG....A.UC....CCAUCUC......GG.ACUCG.GC.CGUGAA.A..
...............CCAGACU.G.C..G...CC..GAUG....GUACUAA.....CUGC
UAA.G.CGUUG.GAA...G...AGUA....GG.U.C.G.CU..G.CCAAG.
>E.hydrolyticum.1 L37451.1/4-118
..CUUGGU.GC.A.C.AG.UGC....UU.G.U.G.G...UA..........C.CC.A...
.......C..GCG....A.UC....CCAUCUC......GG.ACUCG.GC.CGUGAA.A..
...............CCAGACA.G.C..G...CC..GAUG....GUAUCAAC....GCUC
AAG.C..GUUG.GAA...G...AGUA....GG.U.C.G.CC..G.CCAUGG
>E.ezovicum.1 L37445.1/4-118
..UUGGCU.GG.U.A.UA.GGC....GU.C.U.G.A...AC..........C.GA.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGGUAA.A..
...............UCAGACA.G.C..G...CC..GAUG....GUACUAAC....GCUG
AAG.C.GUU...GGA...A..GAGUA....GG.U.C.G.UU..G.UCCAAG
>S.sibiricus.1 L37450.1/2-118
GCCUUGGU.CA.C.A.UG.UGC....CC.C.U.G.G...UA..........C.CC.A...
.......C..GCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUGAA.A..
...............CCAGGUA.G.C..G...CC..GAUG....GUACUGCC....GCUU
AAG.C.GCC...GGA...A..GAGUA....GG.G.U.G.CC..G.CCAAGG
>S.ursincola.1 L37447.1/4-116
..CUUGGU.CA.C.C.AU.AGC....GU.C.A.G.A...UA..........C.CC.A...
.......C..GCG....A.UC....CCAUCUC......GA.ACUCG.GC.CGUGAA.A..
...............CCUGACU.G.C..G...CC..GAUG....GUACUACC....GCUU
AAG.C.GUU...GGA...A..GAGUA....GG.C...G.UC..G.CCAAG.
>Z.mobilis.1 AF088897.1/10366-10481
..CUUGGU.GG.C.U.AU.AGC....GU.C.A.G.U...GA..........C.CC.A...
.......C..CCG....A.UC....CCAUUUC......GA.ACUCG.GA.CGUGAA.A..
...............CCUGUCCUG.C..G...CC..GAUG....GUACUGUU....GCUU
AAG.C.AAC...GGA...A..GAGUA....GG.U.C.G.UC..G.CCAGGC
>T.mutans.1 M34772.1/1-114
...CUGGU.GG.C.C.AU.UGC....GA.G.G.A.G...CC..........U.GA.A...
.......C..CCG....A.CU....CCACUCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.C..G...CC..GAUG....GUACUAUG...UCU..
CAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCAGGU
>uncul.alpha.prote.1 AY934066.1/157-271
..CCUGGU.UG.U.U.AU.AGC....AA.A.G.G.G...UU..........A.AA.A...
.......C..CGG....A.UC....CCAUCUC......GA.ACUCA.UU.GGAGAA.U..
...............UCCUUUA.G.C..G...CC..GAUG....GUACUUAG...UCU..
UAA.G.GCUUG.GGA...G...AGUA....GG.A.C.G.UA..G.CCAGGC
>A.xylosoxidans.1 AJ131590.1/3-114
..CCUGAC.GA.C.C.AU.AGC....AA.G.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGG.
>A.piechaudii.1 AJ131588.1/3-114
..CCUGAC.GA.C.C.AU.AGC....AA.G.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUC.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGG.
>A.denitrificans.1 AJ131589.1/3-115
..CCUGAC.GA.C.C.AU.AGC....GA.G.U.U.G...GU..........C.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGACUUU.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>A.faecalis.1 AJ131586.1/3-115
..CUUGAC.GA.C.C.AU.AGC....GA.G.G.U.G...GU..........C.CC.A...
.......C..ACC....U.UC....CCAUCCC......GA.ACAGG.AU.UGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAAGC
>Alcaligenes.1 X05524.1/5-117
..CCUGAC.GA.C.C.AU.AGC....AA.G.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>A.faecalis.2 X05517.1/3-118
..CUUGAC.GA.C.C.AU.AGA....GC.G.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GC.AGUGAA.A..
...............CGACGCA.U.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UC..G.UCAAGC
>A.faecalis.3 X02628.1/2-114
..CUUGAC.GA.C.C.AU.AGC....GA.G.G.U.G...GU..........C.CC.A...
.......C..ACC....U.UC....CCAUCCC......GA.ACAGG.AU.UGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA..GUGG...ACGG
ACG.U.CUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAAGC
>B.andropogonis.1 AJ131591.1/3-116
..CCUGAU.GA.C.C.AU.AGC....GA.G.U.C.G...GU..........S.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCC.A.C..G...CC..AAUGA....UAGUGCGG..AUU..
..G.C.CCGUG.UGA...A...AGUA....GG.U.A.A.UC..G.UCAGGC
>B.caryophylli.1 AJ131592.1/3-116
..CCUGAU.GA.C.C.AU.AGC....GA.G.U.U.G...GU..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCC.A.C..G...CC..GAUGA....UAGUGCGG..AUU..
..G.C.CCGUG.UGA...A...AGUA....GG.U.A.A.UC..G.UCAGGC
>B.cepacia.1 AJ131593.1/3-115
..CCUGAU.GA.C.C.AU.AGC....GA.G.U.C.G...GU..........C.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCU.A.C..G...CC..GAUGA....UA...GUG..CGGAU
UCC.C.GUGUG...A...A...AGUA....GG.U.A.A.UC..G.UCAGGC
>B.cepacia.2 X02629.1/3-115
..CCUGAU.GA.C.C.AU.AGC....GA.G.U.C.G...GU..........C.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCU.A.C..G...CC..GAUGA....UA...GUG..CGGAU
UCC.C.GUGUG...A...A...AGUA....GG.U.A.A.UC..G.UCAGGC
>C.necator.1 AJ131587.1/3-115
..CCUGGU.GA.C.C.AU.AGC....GA.G.C.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.UC.CGUGAA.A..
...............CAGCUCC.G.C..G...CC..GAUGA....UA...GUG..CGGAU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.CCAGGC
>R.solanacearum.1 AJ131601.1/3-115
..CCUGGU.GA.C.C.AU.AGC....GA.G.U.C.G...GU..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCC.G.C..G...CC..GAUGA....UA...GUG..CGGAU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..C.CCAGGC
>R.pickettii.1 AJ131600.1/3-115
..CCUGGU.GA.C.C.AU.AGC....GA.G.U.C.G...GU..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCC.G.C..G...CC..GAUGA....UA...GUG..CGGAU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>A.temperans.1 AJ131585.1/3-115
..CCUGAU.GA.C.C.AU.AGC....AA.G.U.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGACUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>A.delafieldii.1 AJ131583.1/3-115
..CCUGAU.GA.C.C.AU.AGC....AA.G.U.U.G...GU..........C.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGACUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>C.terrigena.1 X16194.1/2-114
..CCUGAU.GA.C.C.AU.AGC....GA.U.U.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGAAUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>C.terrigena.2 AJ131595.1/3-115
..CCUGAU.GA.C.C.AU.AGC....GA.U.U.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGAAUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>H.taeniospiralis.1 AJ131599.1/3-114
..CCUGAC.GA.C.C.AU.AGC....GA.G.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGG.
>H.palleronii.1 AJ131597.1/3-113
..CCUGAC.GA.C.C.AU.AGC....GA.G.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAG..
>H.pseudoflava.1 AJ131598.1/3-114
..CCUGAC.GA.C.C.AU.AGC....GA.G.U.U.G...GU..........C.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGACUUU.G.C..G...CC..GAUGA....UAGU.......GAGG
GUU.C.CCGUG.UGA...A...AGUA....GG.U.C.A.UC..G.UCAGG.
>V.paradoxus.1 AJ131602.1/3-115
..CCUGAU.GA.C.C.AU.AGC....GA.C.G.U.G...GU..........A.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGACUUU.G.C..G...CC..GAUGA....UA...GUG..CGGGU
UCC.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>L.discophora.1 M35569.1/4-116
..CCUGAC.GA.C.C.AU.AGC....GA.G.G.U.G...GU..........C.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUCA.G.C..G...CC..GAUGA....UA...GUG..CGCAU
UCG.C.GUGUG...A...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>T.intermedia.1 M11538.1/4-116
..CCUGAU.GA.C.C.AU.GGC....GA.A.C.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.GC.CGUGAA.A..
...............CAGUUCA.G.C..G...CC..GAUGA....UA...GUG..CGCAU
UCG.C.GUGUG...A...A...AGUA....GG.A.C.A.UC..G.UCAGGC
>Thiobacillus.1 M11716.1/2-115
..UUUGGC.GG.C.C.AU.AGC....GU.C.U.U.G...GA..........C.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.GA.CGUGAA.A..
...............CGAGACA.G.C..G...CC..GAUGA....UAGU...G..UGGAU
UAC.C..CAUG.CGA...A...AGUA....GG.U.C.A.CC..G.CCAGAC
>T.thioparus.1 M11540.1/3-116
..UCUGAC.GA.C.C.AU.AGC....AG.A.G.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.GGUGAA.A..
...............CGCUCCC.G.C..G...CC..AAUGAUA.GUA.........GGCA
CCU.C.GCCUG.UGA...A...AGUA....GG.U.C.A.UC..G.UCAGAC
>M.methylotrophus.1 M34765.1/1-114
..CUUGGG.GA.C.A.AU.AGC....GG.U.U.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCUC......GA.ACAGG.GC.CGUGAA.A..
...............CGAACUU.G.C..G...CC..AAUGA....UAGUGUAC..UCU..
..U.C.GUAUG.CGA...A...AGUA....GG.U.C.A.UC..C.CCAAGC
>A.serpens.1 X02630.1/3-115
..CUUGGC.GG.C.C.AU.AGC....GA.G.U.U.G...GU..........A.CC.A...
.......C..CCC....U.UC....CCUUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUCA.G.C..G...CC..GAUGA....UA...GUG..CAGAU
CCC.U.GUGUG...A...A...AGUA....GG.U.C.U.CC..G.CCAAGC
>V.stercoraria.1 M35567.1/3-116
..UUUGAC.GA.C.C.AU.AGC....GA.G.U.U.G...GU..........C.CC.A...
.......C..GCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CGACUUA.G.C..G...CC..GAUGA....UAGU...G..UGGAU
UAC.C..CAUG.UGA...A...AGUA....GG.U.C.A.UC..G.UCAAAC
>V.filiformis.1 M35568.1/2-115
..CCUGAU.GA.C.C.AU.AGC....AA.G.G.U.G...GU..........C.CC.A...
.......C..UCC....U.UC....CCAUCCC......GA.ACAGG.AC.AGUGAA.A..
...............CGCCUUA.G.C..G...CC..GAUGA....UAGUGC.....GGUU
CUC.C..CGUG.UGA...A...AGUA....GG.A.C.A.UC..G.UCAGGC
>V.beggiatoides.1 M35566.1/3-117
..CCUGAC.GA.C.C.AC.AGC....GA.C.U.G.U...GA..........A.CC.A...
.......C..CCG....A.CC....CCAUCUC......GA.ACUCG.GU.AGUGAA.A..
...............CCAGUCA.G.C..G...CC..GAUGA....UAGUGUGG...CA..
UAU.G.CCAUG.UGA...A...AGUA....GG.U.C.A.UC..G.UCAGGC
>D.vulgaris.1 M32519.1/4-118
..CCUGGC.GU.C.C.AU.GGA....GG.A.G.G.G...GG..........C.AC.A...
.......C..CUG....A.UC....CCAUUCC......GA.ACUCG.GA.AGUUAA.G..
...............CCCUCCA.U.C..G...CC..GAUGA....UACUGCGG..GGU..
.AG.C.UCGUG.GGA...A...AGUA....GG.C.C.G.AC..G.CCAGGA
>C.fuscus.1 X52297.1/1-116
...CCGGU.GG.C.A.AU.GUC....GG.A.G.G.G...GU..........C.CC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCCUCCA.G.A..G...CC..GAUG....GUACUCCGC...GGGA
AAC.C.GCGCG.GGA...G...AGUA....GG.U.C.G.CU..G.CCGGAU
>C.fuscus.2 X52298.1/2-113
..UUAGGU.GC.C.U.AU.AUC....GG.U.G.G.U...GU............CC.A...
.......C..CUC....U.UC....CCAUUCC......GA.ACAGA.GA.AGUUAA.G..
...............CCCACCA.G.A..G...CC..GAUG....GUACUGCGG..U....
.AA.S.ACGUG.GGA...G...AGUA....GG.U.C.G.GU..G.CCAAAU
>C.coralloides.1 X52301.1/1-117
..UCGGGU.GG.C.A.AU.GUC....GG.A.G.G.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCCUCCA.G.A..G...CC..GAUG....GUACUCCGC...GGGA
AAC.C.GCGUG.GGA...G...AGUA....GG.U.C.G.CU..G.CCGGAU
>N.exedens.1 X52302.1/2-117
..GCUGGU.GG.C.U.AU.GGC....GG.A.A.G.G...GC..........C.AC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GU.CGUUAA.G..
...............ACUUCCA.G.C..G...CC..GAUG....GUACUGCAG...GGGC
GAC.C.CUGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCAGC.
>S.cellulosum.1 X52303.1/2-118
..UCCGGU.GG.U.G.AU.AUC....AA.G.A.A.G...GC..........U.AC.A...
.......C..CCG....A.UC....CCAUACC......GA.ACUCG.GA.AGUUAA.G..
...............CUUCUUG.G.A..G...CC..GAUG....GUACUGCCA...GGGC
AAC.C.UGGUG.GGA...G...AGUA....GG.A.C.G.CC..G.CCGGGA
>Thiovulum.1 M35570.1/5-120
..GUUGGU.GA.U.U.AC.AGA....GA.A.A.A.G...GU..........C.AC.A...
.......C..UCA....G.CU....CCAUUUC......GA.ACCUG.AA.AGUUAA.G..
...............CUUUUCU.U.C..G...UC..GAUAA....UACUGCC....CCCU
ACG.G.GGGUG.GGA...C...GGUA....GA.U.C.G.UU..G.CCAACC
>A.ferrooxidans.1 U18089.1/3485-3600
..UCUGGC.GG.C.C.AU.AGC....GC.A.G.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCUC......GA.ACAGG.AC.CGUGAA.A..
...............CGCUGCA.G.C..G...CC..UAUGA....UAGUUGA....GGGU
CUC.C.CUCCG.CGA...A...AGUC....GG.U.C.A.CC..G.CCAGAC
>A.ferrooxidans.2 M11715.1/3-118
..CCUGGU.GG.C.C.AU.AGC....GA.G.C.G.G...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUUCC......GA.ACUCG.GA.AGUGAA.A..
...............ACGCUUA.G.C..G...CC..GAUGA....UAGUAUG....GGGU
CUC.C.CUAUG.CGA...A...AGUA....GG.A.C.A.CU..G.CCAGGC
>A.thiooxidans.1 M11541.1/4-119
..UCUGGC.GG.C.C.AU.AGC....GC.A.G.U.G...GA..........A.CC.A...
.......C..CCC....U.UC....CCAUCCC......GA.ACAGG.AC.CGUGAA.A..
...............CACUGCA.G.C..G...CC..UAUGA....UAGUUGA....GGGC
CUC.C.CUCCG.CGA...A...AGUC....GG.U.C.A.CC..G.CCAGAC
>A.media.1 X02259.1/3-117
..CCUGGC.GG.C.C.AU.AGC....GC.C.G.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCGGUA.G.C..G...CC..GAUG....GUAGUGUG....GCAU
UUG.C..CAUG.UGA...G...AGUA....GG.A.C.A.CU..G.CCAGGC
>A.salmonicida.1 X02258.1/3-117
..CCUGGC.GG.C.C.AU.AGC....GC.C.G.U.G...GA..........A.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCGGUA.G.C..G...CC..GAUG....GUAGUGUG....GCAU
UUG.C..CAUG.UGA...G...AGUA....GG.A.C.A.CU..G.CCAGGC
>A.hydrophila.1 X00931.1/3-117
..CCUGGC.GG.C.C.AU.AGC....GC.C.G.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCGGUA.G.C..G...CC..GAUG....GUAGUGUG....GCAU
UUG.C..CAUG.CGA...G...AGUA....GG.A.C.A.CU..G.CCAGGC
>C.psychrerythraea.1 X02260.1/3-117
..CUUAGC.GA.C.A.AU.AGU....GC.U.G.U.A...GA..........C.CC.A...
.......C..CUG....A.UC....CCAUUCC......GA.ACUCA.GU.AGUGAA.A..
...............CGCAGUA.G.C..G...CC..GAUG....GUAGUGUGG...GAGU
..U.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UU..G.CUAAGC
>M.marina.1 X02249.1/3-117
..UUUGGU.GA.C.C.AU.AGU....GU.U.G.U.G...GU..........A.CC.A...
.......C..CUG....A.CU....CCAUUCC......GA.ACUCA.GU.AGUGAA.A..
...............CGUAAUA.A.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.U...A.UC..G.CCAGGC
>S.hanedai.1 X15181.1/3-118
..UCUGGA.AA.C.C.AU.AGC....AU.U.G.U.G...GC..........C.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUC.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UU..U.CCAGGC
>S.colwelliana.1 X15180.1/3-118
..UCUGGA.AA.C.C.AU.AGC....AU.U.G.U.G...GC..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUU.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UU..U.CCAGGC
>S.putrefaciens.1 X02250.1/3-118
..UCUGGU.GA.U.A.AU.AGC....AU.U.G.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUU.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UU..G.CCAGGC
>D.nodosus.1 U26684.1/296-411
..CCUGAU.AC.C.C.AU.AGA....GC.U.G.U.G...GU..........A.CC.A...
.......C..CUG....A.AU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAGCA.U.C..G...CC..GAUG....GUAGUGUG....AGGU
CUC.C.UCAUG.UGA...G...AGUA....GG.A.C.A.GU..A.UCAGGU
>E.shaposhnikovii.1 X05053.1/3-118
..CCUGGC.GG.C.C.AU.GGC....GA.A.C.C.G...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCUC......GA.ACUCG.GA.AGUGAA.A..
...............CGGUUCA.G.C..G...CC..GAUGA....UAGUGUG....GGGC
CUC.C.CCAUG.UGA...A...AGUA....GG.U.C.A.CU..G.CCAGGC
>H.halophila.1 X05052.1/3-119
..CCUGGC.GA.C.C.AU.AGC....GA.G.C.G.G...GA..........A.CC.A...
.......C..CCG....A.UC....CGAUGCC......GA.ACUCG.GC.AGUGAA.A..
...............CCGCUCA.G.C..G...CC..GAUG....GUAGUGCGA..CCA.C
GCU.G.UCGUG.CGA...G...AGUA....GG.U.C.A.UC..G.CCAGGC
>H.neapolitanus.1 M11537.1/2-117
..CCUGGU.GU.C.C.AU.AGA....GC.G.G.U.G...GA..........A.CC.A...
.......C..CUG....U.UC....CCAUCCC......GA.ACACA.GA.AGUGAA.A..
...............CGCCGCA.U.C..G...CC..GAUGA....UAGUGUG....GGGU
CUC.C.CCAUG.UGA...A...AGUA....GG.U.C.A.AC..G.CCAGGC
>B.aphidicola.1 U09230.1/4482-4597
..CCUGGU.AA.A.A.AU.AGU....GU.A.G.U.G...GU..........A.CC.A...
.......C..CUG....A.AU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCUACA.A.C..G...CC..AAUG....GUAGUACG....GGGU
CUC.C.CCGUG.UGA...G...AGUA....GG.U.A.U.CA..G.CCAGGC
>E.coli.1 X00501.1/7-121
...CUGGC.GG.C.C.GU.AGC....GC.G.G.U.G...GU..........C.CC.A...
.......C..CUG....A.CC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCCGUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.CGA...G...AGUA....GG.G.A.A.CU..G.CCAGAC
>Escherichia_coli_O15.1 AB035926.1/5989-6104
..CCUGGC.GG.C.C.UU.AGC....GC.G.G.U.G...GU..........C.CC.A...
.......C..CUG....A.CC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCCGUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.CGA...G...AGUA....GG.G.A.A.CU..G.CCAGGC
>P.shigelloides.1 X02264.1/3-118
..CCUGGC.GG.C.C.AU.AGU....GC.G.G.U.G...GU..........C.CC.A...
.......C..CUG....A.CC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCUGUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.G.A.A.CU..G.CCAGGC
>P.vulgaris.1 X02039.1/3-118
..UCUGGC.GG.C.C.AU.AGC....GC.A.G.U.G...GU..........C.CC.A...
.......C..CUG....A.UC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGUUGUA.G.C..G...CC..GAUGA....UGGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.G.A.A.CU..G.CCAGGC
>Salmonella_enterica_.1 AF170176.1/1092-1207
..CCUGGC.GG.C.A.CU.AGC....GC.G.G.U.G...GU..........C.CC.A...
.......C..CUG....A.CC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCCGUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.CGA...G...AGUA....GG.G.A.A.CU..G.CCAGGC
>C.burnetii.1 X79704.1/3397-3511
..CCUGGC.GG.C.C.AU.AGC....GA.G.C.G.G...GC..........C.CC.A...
.......C..CUG....C.UU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............ACGCUUAAG.G..C...CC..GAUGA....UAGU...G..UGGGU
CUC.C..CAUG.CGA...A...AGUA....GG.U.C.A.CC..G.CCAGUU
>L.pneumophila.1 Y00159.1/2-117
..CUUGGC.GA.C.U.AU.AGC....GA.U.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UA....CCAUCUC......GA.ACUCA.GA.AGUGAA.A..
...............CAUUUCC.G.C..G...CC..AAUGA....UAGUGUG....AGGC
UUC.C.UCAUG.CGA...A...AGUA....GG.U.C.A.UC..G.CCAGGA
>L.pneumophila.2 X05081.1/5-114
.....GGC.GA.C.U.AU.AGC....GA.U.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UA....CCAUCUC......GA.ACUCA.GA.AGUGAA.A..
...............CAUUUCC.G.C..G...CC..AAUGA....UAGUGUG....AGGC
UUC.C.UCAUG.CGA...A...AGUA....GG.U.C.A.UC..G.CCA...
>M.capsulatus.1 M34758.1/2-116
..CCUGGC.GG.C.C.AG.AGC....GA.G.C.G.G...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.CCUCG.GA.AGUGAA.A..
...............CCGCUUA.G.C..G...CC..GAUGAUA.GUGCAAGAA..U....
..A.C.CUGUG.CGA...A...AGUA....GG.G.A.A.CU..G.CCAGGC
>M.capsulatus.2 M34762.1/3-116
...UUGGU.GA.C.C.AU.AGC....GA.G.C.G.U...GA..........C.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUA.G.U..G...CC..GAUGA....UAGUGUGG...CA.A
UUU.G.CCAUG.CGA...A...AGUA....GG.G.A.A.UU..G.CMAAA.
>M.agile.1 M34759.1/7-109
.......U.GG.C.C.AU.AGC....GA.G.C.G.U...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUA.G.C..G...CC..GAUGA....UAGUGCGA...CAGG
U.U.G.UCGUG.CGA...A...AGUA....GG.G.A.A.U...........
>M.rubra.1 M34760.1/2-117
..CUUGGU.GA.C.C.AU.AGC....AA.G.C.G.U...GA..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUA.G.C..G...CC..GAUGA....UAGUGUGG...CAGG
U.U.G.CCAUG.UGA...A...AGUA....GG.U.C.A.UC..G.CMAAGC
>M.methanica.1 M34761.1/2-116
..CUUGGU.GA.C.C.AU.AGC....GA.G.C.G.U...GR..........A.CC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUGAA.A..
...............CCGCUUU.G.C..G...CC..GAUGA....UAGUGUGG...CAGU
U.U.G.CCAUG.UGA...A...AGUA....GG.U.C.A.UC..G.CMAAG.
>H.aegyptius.1 X05519.1/1-116
..UCUGGC.GG.C.G.AU.AGU....GC.G.G.U.G...GA..........C.CC.A...
.......C..CUG....A.GA....CCAUACC......GA.ACUCA.GA.AGUGAA.A..
...............CGCUGUA.A.U..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.G.C.A.CC..G.CCAGGU
>A.calcoaceticus.1 X02631.1/2-115
..GCUGGC.GA.C.C.AU.AGC....AA.G.A.G.U...GA..........A.CC.A...
.......C..CUG....A.UC....CCUUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CCUCUUC.G.C..G...CU..GAUG....GUAGUGN.....GGGU
UAC.C..CAUG.UGA...G...AGUA....AG.U.C.A.UC..G.CCAGCU
>A.vinelandii.1 X01555.1/3-118
..CUUGAC.GA.U.C.AU.AGA....GC.G.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GC.AGUGAA.A..
...............CGACGCA.U.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UAA...G...AGUA....GG.U.C.A.UC..G.UCAGGC
>P.aeruginosa.1 X06694.1/9-124
..CUUGAC.GA.U.C.AU.AGA....GC.G.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCUUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CGACACA.U.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UC..G.UCAAGC
>P.fluorescens.1 X01557.1/3-118
..CUUGAC.GA.C.C.AU.AGA....GC.A.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GU.AGUGAA.A..
...............CGAUGCA.U.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UC..G.UCAAGA
>P.stutzeri.1 M34776.1/2-116
..CCUGGU.GG.C.U.AU.GGC....GA.G.G.A.G...GC..........C.UA.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUUAA.A..
...............CUCCUCA.G.U..G...CC..GAUG....GUACUAUG...UCU..
UAA.G.ACCUG.GGA...G...AGUA....GG.U.C.G.UC..G.CCAGGC
>P.fluorescens.2 AF134704.1/5562-5676
..CUUGAC.GA.C.C.AU.AGA....GC.A.U.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GC.AGUGAA.A..
...............CGAUGCA.U.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UC..G.UCAAG.
>Thiomicrospira.1 M11536.1/2-116
..CUUGGG.GA.C.A.AU.AGC....AA.G.A.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCUUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGUUUUA.G.C..G...CC..GAUG....GUAGUGUG...UCAGU
..U.G.GCAUG.UGA...G...AGUA....GG.U.C.A.UC..C.CCAAGC
>T.pelophila.1 M11535.1/2-117
..CUUGGC.GA.C.C.AU.AGC....GG.A.A.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCUC......GA.ACUCA.GA.AGUGAA.A..
...............CGUUCCA.G.C..G...CC..AAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.CGA...G...AGUA....GG.U.C.A.UC..G.CCAAGC
>B.alba.1 M35565.1/3-118
..CUUGGC.GA.C.C.AU.AGC....AA.A.U.A.G...GA..........A.CC.A...
.......C..CCG....A.CC....CCAUCCC......GA.ACUCG.GU.AGUGAA.A..
...............CUGUUCU.G.C..G...CC..GAUGA....UAGUGUG....GAUA
CUC.U.CCAUG.UGA...A...AGUA....GG.U.U.A.UC..G.CCAAGA
>T.nivea.1 M35563.1/5-120
..CCUGGU.GU.C.C.AU.AGA....GC.A.C.U.G...GA..........A.CC.A...
.......C..CUG....A.UC....CCAUCCC......GA.ACUCA.GA.AGUGAA.A..
...............CGGUGCA.U.C..G...CC..GAUG....GUAGUGUG....GGGC
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.AC..G.CCAGGC
>A.logei.1 X02254.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.A.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGUAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>A.fischeri.1 X02253.1/3-118
..CCUGGC.GA.C.C.AU.AGC....AU.U.A.U.G...GA..........C.CC.A...
.......C..CUG....A.UC....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGUAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>G.hollisae.1 X16193.1/4-119
..CUUGGC.GA.C.C.AU.AGC....GC.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CAGAGCA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>L.pelagia.1 X02251.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>L.anguillarum.1 X00932.1/3-118
..CCUGGC.GA.C.C.AU.AGU....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CACAACA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>P.damselae.1 X02252.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.G.U.G...GU..........C.CC.A...
.......C..CUG....A.AU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAGCA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>P.leiognathi.1 X02255.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.A.U.G...GA..........C.CC.A...
.......C..CUG....A.UC....CCAUGCC......GA.ACUCA.GU.AGUGAA.A..
...............CGUAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>Photobacterium.1 X02022.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.A.U.G...GA..........C.CC.A...
.......C..CUG....A.UC....CCUUGCC......GA.ACUCA.GU.AGUGAA.A..
...............CGUAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.vulnificus.1 X00930.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.AC....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAAUA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.nereis.1 X03701.1/3-119
..CCCGGC.GA.C.C.AU.AGC....GC.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UUU...CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAGUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.CC..G.CCAGGC
>V.cincinnatiensis.1 X02248.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GU.AGUGAA.A..
...............CGAAACA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.mediterranei.1 X15179.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGC
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.cholerae.1 X02239.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........U.CC.A...
.......C..CUG....A.CU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAAUA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.harveyi.1 X02242.1/7-110
......GC.GA.C.C.AU.AGC....GA.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAUUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.U...........
>V.natriegens.1 X02236.1/3-119
..CCUGGC.GA.C.C.AU.AGU....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....ACUU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.fluvialis.1 X02237.1/3-118
..CCUGGC.GA.C.C.AU.AGU....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAACA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.aestuarianus.1 X05041.1/3-118
..CUUGGC.GA.C.C.AU.AGU....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.CU....CUAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGUAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGC
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>Vibrio.1 M16533.1/3-118
..UCUGGA.AA.C.C.AU.AGC....AU.U.G.U.G...GC..........C.CC.A...
.......C..CUG....A.UC....CCAUCUC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUC.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.U.C.A.UU..U.CCAGGC
>V.harveyi.2 X02030.1/3-120
..CUUGGC.GA.C.C.AU.AGC....GA.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UCUU..CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAUUA.G.C..G...CC..GAUG....GUAGUGUG....GGGC
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.tubiashii.1 X06688.1/3-118
..CUUGGC.GA.C.C.AU.AGC....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGCAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGC
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.parahaemolyticus.1 X02235.1/3-118
..CCUGGC.GA.C.C.AU.AGU....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.diazotrophicus.1 X02243.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GA.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAUUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
CUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.metschnikovii.1 X02246.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAACA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.alginolyticus.1 X02241.1/3-119
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UUU...CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAAUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.mimicus.1 X02238.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GU.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUUCC......GA.ACUCA.GA.AGUGAA.A..
...............CGAAACA.G.C..G...UC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GA.A.C.A.UC..G.CCAGGC
>V.proteolyticus.1 X02247.1/3-118
..CCUGGC.GA.C.C.AU.AGC....GA.U.U.U.G...GA..........C.CC.A...
.......C..CUG....A.UU....CCAUGCC......GA.ACUCA.GU.AGUGAA.A..
...............CGAAUUA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CCAGGC
>V.ordalii.1 X06687.1/3-118
..CUUGGU.GA.U.C.AU.AGC....GU.U.G.U.G...GA..........C.CC.A...
.......C..CUG....A.CU....CCAUGCC......GA.ACUCA.GA.AGUGAA.A..
...............CACAACA.G.C..G...CC..GAUG....GUAGUGUG....GGGU
UUC.C.CCAUG.UGA...G...AGUA....GG.A.C.A.UC..G.CUAGGC
>L.illini.1 D90253.1/251-366
..GCUGGC.GC.C.A.AU.AGA....GA.G.G.G.U...GA..........U.AC.A...
.......C..CUG....U.UC....CCAUCCC......GA.ACACA.GA.AGUUAA.G..
...............CCCCUCA.U.C..G...CC..GAUG....GUACUGCAG...AGUU
CGC.U.CUGUG.GGA...G...AGCA....GG.A.C.G.GU..G.CCA.CA
>L.biflexa.1 D90255.1/422-538
..CCUGGU.GA.U.U.AU.GGA....GA.G.A.A.G...GC..........C.AU.A...
.......C..CCG....U.UC....CCAUUCC......GA.ACACG.GA.AGUCAA.G..
...............CUUCUCA.U.C..G...CC..GAUG....GUACUAUUG...GGUU
CGC.U.CAAUG.GGA...G...AGUA....GG.A.C.A.UU..G.CCGGGU
>L.interrogans.1 AB001721.1/2735-2851
..CCCGGU.GA.C.U.AU.AGA....GA.G.A.G.G...GC..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CCUCUCA.U.C..G...CU..GAUG....GUACUAUG...UGGUU
CGC.U.GCAUG.GGA...G...AGUA....GG.A.C.G.UU..G.CCGGGU
>B.burgdorferi.1 X57791.1/153-262
..CCUGGU.GG.U.U.AA.AGA....AA.A.G.A.G...GA..........A.AC.A...
.......C..CUG....U.UA....UCAUUCC......GA.ACACA.GA.AGUUAA.G..
...............CUCUUAU.U.C..G...CU..GAUG....GUACU.......GC..
GAG.U.UCGCG.GGA...G...AGUA....GG.U.U.A.UU..G.CCAGG.
>S.aurantia.1 AY599019.1/4972-5080
..CCUGGU.GA.U.C.AU.AGC....GA.A.G.A.G...GU..........C.CC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CUCUUCA.G.C..G...CC..GAUG....GUACUGCUA..U....
.......UGCG.GGA...G...AGUA....GG.U.C.G.UC..G.CCAGGC
>A.laidlawii.1 X61066.1/168-278
..UCUGGU.GA.C.G.AU.GGC....AA.G.A.U.G....U..........U.CC.A...
.......C..CUG....U.UC....CCUACCC......GA.AUAUA.GA.AGUUAA.G..
...............CAUCUUA.G.C..G...CC..GACGA....UA....GU..UAUUA
CAA.U.UAGCG...A...A...AAUA....GG.A.C.G.UU..G.CCAGGC
>A.laidlawii.2 X61068.1/253-364
..UCUGGU.GA.C.G.AU.GGC....AA.G.A.U.G...GU..........U.CC.A...
.......C..CUG....U.UC....CCAUCCC......GA.ACACA.GA.AGUUAA.G..
...............CAUCUUA.G.C..G...CC..GACGA....UA....GU..UAUUA
CAA.U.UAGCG...A...A...AAUA....GG.A.C.G.UU..G.CCAGGC
>S.melliferum.1 X06098.1/1-107
..UCUGGU.GC.U.U.AU.GGC....AU.A.G.U.G...GA..........C.AC.A...
.......C..CCG....U.UC....CCAUCCC......GA.ACACG.GA.AGUUAA.G..
...............CACUAUU.A.C..G...CC..GACGA....UAG........CCGC
AAG.G.......UGA...A...AAUA....GG.G.C.A.GU..G.CCAGGU
>M.flocculare.1 U01070.1/190-289
.....AGU.AA.C.A.AU.AGC....AA.A.A.G.G...GA..........U..C.A...
.......C..CUG....A.UA....CCAUUCC......GA.ACUCA.GU.AGUUAA.G..
...............CCUUUUU.A.C..G...CC..GAAAA....UACUAGAA......A
UA..........GGA...A...AAUA....GG.A.A.G.UU..A.CUC...
>M.gallisepticum.1 AF036708.1/19036-19140
..UGUGAU.AU.C.G.AU.AUC....GU.G.A.U.G...GA..........A.AC.A...
.......C..CUG....G.UC....CCAUUCC......GA.ACCCA.GA.AGUUAA.G..
...............CAUCAUG.G.A..G...CC..AAAG....GUA.........GCGC
AAG.C.A.......A...G...AAUA....GG.A.A.A.AU..A.UCACGC
>M.haemofelis.1 L24488.1/3-117
..CUUGGU.GG.U.U.AU.GGC....GG.A.G.U.G...AA..........U.GC.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GC.CGUGAA.A..
...............CGCUCCA.G.C..G...CU..GAUG....GUACUUCG....CCUC
AAG.G..CACG.GGA...G...AGUA....AG.U.C.G.CU..G.CCAGGU
>Mycoplasma.1 M29167.1/1-109
..UCUGGU.GG.U.U.AU.AGC....AU.A.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUCUAUU.A.C..G...GU..GAAGA....UAUUACUU...AUGU
GA..........GAA...A....AUA....GC.A.A.G.CU..G.CCAGUU
>M.capricolum.1 V00646.1/1-107
...UUGGU.GG.U...AU.AGC....AU.A.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUCUAUU.A.C..G...GU..GAAGA....UAUUACUG...AUGU
GA..........GAA...A....AUA....GC.A.A.G.CU..G.CCAGUU
>M.hyopneumoniae.1 M30199.1/68-167
.....AGU.AA.C.A.AU.AGC....AA.A.A.G.G...GA..........U..C.A...
.......C..CUG....A.AU....CCAUUCC......GA.ACUCA.GU.AGUUAA.G..
...............CCUUUUU.A.C..G...CC..GAAGA....UACUAGAA......A
UA..........GGA...A...AAUA....GG.G.A.G.UU..A.CUC...
>M.gallisepticum.2 L08897.1/5770-5874
..UGUGAU.AU.C.G.AU.AUC....GU.G.A.U.G...GA..........A.AC.A...
.......C..CUG....G.UC....CCAUUCC......GA.ACCCA.GA.AGUUAA.G..
...............CAUCAUG.G.A..G...CC..AAAG....GUA.........GCGC
AAG.C.A.......A...G...AAUA....GG.A.A.A.AU..A.UCACGC
>M.mycoides.1 X06099.1/1-107
...UUGGU.GG.U...AU.AGC....AU.A.G.A.G...GU..........C.AC.A...
.......C..CUG....U.UC....CCAUGCC......GA.ACACA.GA.AGUUAA.G..
...............CUCUAUU.A.C..G...GU..GAAAA....UAUUACUU...AUGU
GA..........GAA...G....AUA....GC.A.A.G.CU..G.CCAGUU
>Ureaplasma_urealytic.1 AF272626.1/2982-3085
..UGUAGU.GA.U.C.AU.AUC....AG.A.G.U.G...GA..........A.AU.A...
.......C..CUG....U.UC....CCAUCCC......GA.ACACA.GA.AGUCAA.G..
...............CACUCUA.G.A..G...CC..GAAAA....UA.........GCGC
AAG.U.........A...A...AAUA....GG.U.C.A.UC..G.CUACGC
>T.neapolitana.1 AJ872266.1/17328-17444
..CCGGGU.GC.C.G.AU.ACUG...GG.G.C.G.G...GA..........A.AC.A...
.......C..CCG....G.UU....CCAUUCC......GA.ACCCG.GC.CGUUAA.G..
...............CCGCCCU.G.G..G...CC..GAUG....GUAGUAUGG...GGGC
AGC.C.CCAUG.CGA...G...AGUA....GG.U...A.GC..G.CCCGGG
>V.spinosum.1 X06578.1/1-116
..UCCGGU.GA.C.G.AU.AGC....GA.G.A.A.G...GU..........C.AC.A...
.......C..CCG....U.UC....CCAUACC......GA.ACACG.GA.AGUGAA.G..
...............CUUCUCA.G.C..G...CC..GACG....GUAGUUCGG...GGCU
GCC.C.UCCCG.UGA...G...AGUA....GG.A.C.G.UU..G.CCGGC.
>P.falciparum.1 M19136.1/148-266
..UGACUC.GU.U.C.AU.ACU....AC.A.G.U.G...GC..........C.AC.A...
.......C..CAG....A.UC....CCAUCA.......GA.ACUCU.GA.AGUUAA.G..
...............CACUGUA.A.G..G...CU..UGGCUA..GUACUGAGG..UGGGA
GAC.C.GCUCG.GGA...A..CACCA....GG.U...G.AU..G.AGUCAU
>C.parvum.1 L20049.1/222-341
..GCAAUC.GG.C.C.AU.ACU....AC.A.U.C.G...AA..........U.AU.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUCAA.G..
...............CGGUGUA.A.G..G...UU..CGGUUA..GUACUAGGG..UGGGG
GAC.C.ACCUG.GGA...A..GACCA....GA.A.U.G.UC..G.AUCGCC
>E.tenella.1 M86547.1/142-262
..GCCGUC.GU.U.C.AU.ACU....GC.G.U.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCU.......GA.ACUCC.GA.AGUUAA.U..
...............CGGCGCA.A.G..G...CC..CGGUUA..GUACUGCGG..UAGGG
GAC.U.CCGCG.GGA...A...UCCU..UUGG.G.U.G.AU..G.ACGGCC
>T.gondii.1 AF158095.1/1-122
..GCUGUC.GG.U.C.AU.ACU....GC.G.U.C.G...AA..........U.AC.A...
.......C..CGG....A.UC....CCUUCA.......GA.CCUCC.GA.AGUUAA.G..
...............CGGCGCA.A.G..G...CC..CGGUUA..GUACUUGGG..UGGGG
GAC.U.CCCAG.GGA...A..UACCC..UCGG.G.U.G.CU..G.ACAGCU
>B.vorax.1 K02343.1/1-119
..GUUAUC.GG.C.C.AU.ACU....AA.G.C.C.A...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUUC.......GA.ACUCC.GA.AGUUAA.G..
...............CGGCUUA.A.G..G...CA..UGGUUA..GUACUAAGG..UGGGG
GAC.C.GCUUG.GGA...A..GCCCA....UG.U...G.CU..G.AUAGCU
>T.thermophila.1 X00475.1/121-239
..GCUGUC.GG.C.C.AU.ACU....AA.G.G.U.G...AA..........A.AC.A...
.......C..CGG....A.UC....CCAUUC.......GA.ACUCC.GA.AGUUAA.G..
...............CGCCUUA.A.G..G...CU..GGGUUA..GUACUAAGG..UGGGG
GAC.C.GCUUG.GGA...A..GUCCC....AG.U...G.UC..G.ACAGCC
>T.thermophila.2 J01893.1/5-114
......UC.GG.C.C.AU.ACU....AA.G.G.U.G...AA..........A.AC.A...
.......C..CGG....A.UC....CCAUUC.......GA.ACUCC.GA.AGUUAA.G..
...............CGCCUUA.A.G..G...CU..GGGUUA..GUACUAAGG..UGGGG
GAC.C.GCUUG.GGA...A..GUCCC....AG.U...G.UC..G.A.....
>P.tetraurelia.1 J01872.1/1-119
..GUUGGU.GG.C.C.AU.ACU....AA.G.C.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUUC.......GA.ACUCC.GA.AGUUAA.G..
...............CGGCUUA.A.G..G...CG..AGGUUA..GUACUAAGG..UGGGG
GAC.C.GCUUG.GGA...A..GUCCU....CG.U...G.UU..G.ACAACC
>E.octocarinatus.1 AJ419791.1/210-328
..GCUAUC.GG.C.C.AU.ACU....AA.G.C.C.A...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCC.......GA.ACUCC.GA.AGUUAA.G..
...............CGGUUUA.A.G..G...CC..UGUUAA..GUACUGAGG..UGGGG
GAC.C.ACUCG.GGA...A..CUUCA....GG.U...G.CU..G.AUAGCU
>B.japonicum.2 J01851.1/1-119
..GUUGUC.GG.C.C.AU.ACU....AU.G.C.C.U...AA..........C.GC.A...
.......C..CAG....A.UC....CCAUCC.......GA.ACUCU.GA.AGUUAA.G..
...............CGGCAUA.A.G..G...CG..AGGUUA..GUACUUGGG..UGGGG
GAC.C.GCCAG.GGA...A..GCCCU....CG.U...G.CU..G.ACAGCU
>C.cohnii.1 M25115.1/1-122
..GCUGAC.GG.C.C.AU.ACC....GU.G.U.C.G...AA..........U.GC.A...
.......C..CGG....A.UC....UCUUCU.......GA.CCUCC.GA.AGUUAA.G..
...............CGGCACA.G.G..G...CC..CGGAUA..GUACUGGGG..UGGGG
GAC.C.GCCCG.GGA...A..GUCCU..UAGG.G.U.G.CU..G.UCAGCU
>P.chesapeaki.1 AY305327.1/3653-3773
..GCCAGC.GG.C.C.AU.ACU....GC.A.U.C.G...AA..........U.AC.G...
.......C..CGG....A.UC....CCAUCC.......GA.ACUCC.GA.AGUUAA.G..
...............CGGUGCA.A.G..G...CC..CGGAUA..GUACUGGGG..UGGGG
GAC.C.GCCCG.GGA...A..GUCCU..UAGG.G.U.G.CU..G.CUGGC.
>A.castellanii.1 M34003.1/489-607
..GGAUAC.GG.C.C.AU.ACU....GC.G.C.A.G...AA..........A.GC.A...
.......C..CGC....U.UC....CCAUCC.......GA.ACAGC.GA.AGUUAA.G..
...............CUGCGCC.A.G..G...CG..GUGUUA..GUACUGGGG..UGGGC
GAC.C.ACCCG.GGA...A..UCCAC....CG.U...G.CC..G.UAUCCU
>A.castellanii.2 M28984.1/1-119
..GGAUAC.GG.C.C.AU.ACU....GC.G.C.A.G...AA..........A.GC.A...
.......C..CGC....U.UC....CCAUCC.......GA.ACAGC.GA.AGUUAA.G..
...............CUGCGCG.A.G..G...CG..GUGUUA..GUACUGGGG..UGGGC
GAC.C.ACCCG.GGA...A..UCCAC....CG.U...G.CC..G.UAUCCU
>D.purpureum.1 DQ340386.1/10887-11006
..AGAUAC.GG.C.C.AU.ACC....AU.G.U.A.A...GA..........A.AA.AU..
.......C..CUC....A.UC....UCGUUC.......GA.UCUGA.GA.AGAUAA.G..
...............UUGCAUC.G.G..G...CC..UUCCUA..GUACUCAAG..UUGGA
GAC.A.AUUGG.GGA...A..AAUAA....GG.U...G.CU..G.UAUCUU
>D.discoideum.1 M25202.1/1-119
..GUAUAC.GG.C.C.AU.ACU....AG.G.U.U.G...GA..........A.AC.A...
.......C..AUC....A.UC....CCGUUC.......GA.UCUGA.UA.AGUAAA.U..
...............CGACCUC.A.G..G...CC..UUCCAA..GUACUCUGG..UUGGA
GAC.A.ACAGG.GGA...A..CAUAG....GG.U...G.CU..G.UAUACU
>P.polycephalum.1 X02036.1/1-119
..GGAUGC.GG.C.C.AU.ACU....AA.G.G.A.G...AA..........A.GC.A...
.......C..CUC....A.UC....CCGUCC.......GA.UCUGA.GA.AGUUAA.G..
...............CUCCUUC.A.G..G...CG..UGGUUA..GUACUGGGG..UGGGG
GAC.C.ACCUG.GGA...A..UCCCA....CG.U...G.CU..G.CAUUCU
>C.paramecium.1 X06839.1/3-124
..CUGUAC.GG.U.C.AU.ACC....UG.G.U.U.G...GA..........A.AC.G...
.......G..CGG....A.UC....CCGUCC.......GA.UCUCC.GA.AGCUAA.G..
...............CAACCAU.G.G..G...CG..UGUCUA..GUACUCAGG..UGGGG
GAC.C.ACUGG.GGA...A..GCGCN.NNACG.U...A.CU..G.UACAGC
>D.papillatum.1 AY007786.1/359-476
..GGAUAC.GA.C.C.AU.ACU....CU.G.G.U.G...AA..........A.GC.A...
.......C..CCC....A.UC....CCGCCU.......GA.UUUGG.GA.AGUUAA.G..
...............CACCAGC.A.G..G...CU..GACUA...GUACUGCGG..UGAGU
GAU.C.ACGUG.GGA...A...CCCC....AG.G.U.G.UU..G.UAUUCU
>E.gracilis.1 X01484.1/2-120
..GCGUAC.GG.C.C.AU.ACU....AC.C.G.G.G...AA..........U.AC.A...
.......C..CUG....A.AC....CCGUUC.......GA.UUUCA.GA.AGUUAA.G..
...............CCUGGUC.A.G..G...CC..CAGUUA..GUACUGAGG..UGGGC
GAC.C.ACUUG.GGA...A..CACUG....GG.U...G.CU..G.UACGCU
>E.gracilis.2 X02031.1/1-118
..GAGUAC.GG.C.C.AU.ACU....AC.C.G.G.G...AA..........U.AC.A...
.......C..CUG....A.AC....CCGUUC.......GA.UUUCA.GA.AGUUAA.G..
...............CCGGGUU.A.G..G...CC..CAGUUA..GUACUGAG...UGGGC
GAC.C.ACUUG.GGA...A..CACUG....GG.U...G.CU..G.UACGCU
>E.sulcatum.1 AF095839.1/346-228
..GCGUAC.GG.C.C.AU.ACU....AU.G.G.G.G...AA..........U.AC.A...
.......C..CUG....A.UC....CCGUCC.......GA.UUUCA.GA.AGUUAA.G..
...............CCUCAUC.A.G..G...CA..UCCUAA..GUACUAGGG..UGGGC
GAC.C.ACCUG.GGA...A..CCGGA....UG.U...G.CU..G.UACGCU
>C.fasciculata.1 M28975.1/65-183
..GAGUAC.GA.C.C.AU.ACU....UG.A.G.U.G...AA..........A.AC.A...
.......C..CAU....A.UC....CCGUCC.......GA.UUUGU.GA.AGUUAA.G..
...............CACCCAC.A.G..G...CU..UAGUUA..GUACUGAGG..UCAGU
GAU.G.ACUCG.GGA...A..CCCUG....AG.U...G.CC..G.UACUCC
>H.megaseliae.1 AY547485.1/1-119
..AGGUAC.GU.U.C.AU.ACU....UU.G.C.U.G...AA..........U.AC.A...
.......C..CAU....A.UC....CCGUCC.......GA.UUUGU.GA.AGUUAA.G..
...............CAGCUAU.A.G..G...CC..ACGUUA..GUACUAAGG..UUAGU
GAU.A.ACUUG.GGA...A..CCCGC....GG.U...G.AU..G.UACCUC
>T.conorhini.1 AJ272600.1/602-724
..GGGUAC.GA.C.C.AU.ACU....UG.G.C.C.A...AA..........U.GC.A...
.......C..CAC....A.UC....CCGUCC.......GA.UUUGU.GA.AGUUAA.G..
..............CCGGUCAC.A.G..G...CC..UCGUUA..GUACGGCGNNAWCAGU
GAUNG.GCGUU.GGA...A..CCCGG....GG.U...G.CC..G.UACCCU
>T.rangeli.1 AF083351.1/469-590
..GGGUAC.GAGC.C.AU.ACUU...AG.G.C.C.G...AA..........C.GC.A...
.......C..CAC....A.UC....CCGUCCA......GUCUCUGU.GA.AGUUAA....
...............CGCGCAC.A.G..G...CC..UCGUUA..GUACGGCGA..UGCGU
GAU.G.GCGCU.GGA...A..CCCGG....GG.U...G.UC..G.UACUCU
>T.cruzi.1 X54477.1/2-120
..GAGUAC.GA.C.C.AU.ACU....UG.A.G.U.G...AA..........U.AC.A...
.......C..CAU....A.UC....CCGUCC.......GA.UUUGU.GA.AGUUAA.G..
...............CGCCCAC.A.G..G...CU..UCGUCA..GUACGGCGA..UCAGU
GAU.G.GCGCU.GGA...A..CCCGG....GG.U...G.CC..G.UACUCC
>B.simplex.1 X01543.1/1-118
..AGCUAC.GG.C.C.AU.ACA....CA.C.C.A.G...AA..........A.GC.U...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGAUAA.U..
...............CUGGUGC.U.G..G...CG..CGGUCA..GUACUGUCG..UGGGA
GAC.C.AGAUG.GGA...A..UACCG....CG.U...G.CU..G.UAGUU.
>P.irregulare.1 X01544.1/1-118
..AGCUAC.GG.C.C.AU.ACA....UA.G.A.U.G...AA..........A.AU.A...
.......C..CGG....A.UC....CCGUCC.......GA.UCUCC.GA.AGUCAA.G..
...............CAUCUAA.U.G..G...CG..ACGUCA..GUACUGUGA..UGGGG
GAC.C.GCACG.GGA...A..UACGU....CG.U...G.CU..G.UAGUU.
>C.kikuchii.1 DQ178956.1/683-802
..ACGAAC.GA.C.C.AC.AGA....UA.C.G.U.G...AA..........A.GC.U...
.......A..GGC....A.UC....CCGUCC.......GC.UCUGC.CAUAUAUAA.G..
...............CACGUAA.U.C..G...CU..GGAUUA..GUACUACGG..UGGGU
GAC.C.ACGUG.GGA...A..UCCCC....AG.U...G.UU..G.UUCGUU
>K.microsticta.1 M58387.1/5-112
......AC.GG.C.C.AC.AGU....CA.G.C.U.G...AA..........A.AC.U...
.......G..GGC....A.UC....CCGUCC.......GC.UCUGC.CAUACAUAA.G..
...............CAGUUGA.A.C..G...GC..AGAUUA..GUACCACGG..UGGGU
GAC.C.ACCUG.GGA...A..UCCCU....GC.U...G.C...........
>P.graminea.1 X58912.1/148-266
..AGCUAC.GG.C.C.AU.ACA....AU.G.U.U.G...AA..........A.AC.A...
.......C..CGG....A.UC....CCGUCC.......GA.UCUCC.GC.AGUUAAAG..
...............CAACAUC.U.G..G...AC..CAGUCA..GUACUAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UACUG....GU.U...G.CU..G.UAGUU.
>E.nidulans.1 X00687.1/1-119
..ACAUAC.GA.C.C.AU.AGG....GU.G.U.G.G...AG..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GU..AGGUUA..GUAGUAUGG..UGGGU
GAC.C.ACAUG.CGA...A..UCCCU....AC.U...G.UU..G.UAUGU.
>E.nidulans.2 X03567.1/108-226
..ACAUAC.GA.C.C.AU.AGG....GU.G.U.G.G...AA..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GC..UGGUUA..GUAGUAUGG..UGGGU
GAC.C.ACAUG.CGA...A..UCCCA....GC.U...G.UU..G.UAUGU.
>E.nidulans.3 X00689.1/1-119
..ACAUAC.GA.C.C.AU.AGG....GU.G.U.G.G...AG..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GC..UGGUUA..GUAGUAUGG..UGGGU
GAC.C.ACAUG.CGA...A..UCCCA....GC.U...G.UU..G.UAUGU.
>A.niger.1 X00691.1/1-119
..ACAUAC.GA.C.C.AC.AGG....GU.G.U.G.G...AA..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GG..AGGUUA..GUAGUUGGG..UGGGU
GAC.C.ACCAG.CGA...A...UCCC....UU.C.U.G.UU..G.UAUGU.
>P.chrysogenum.1 X00692.1/1-119
..ACAUAC.GA.C.C.AU.AGG....GU.G.U.G.G...AA..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GU..GAGUUA..GUAGUUGGG..UGGGU
GAC.C.ACCAG.CGA...A..UCCUC....AC.U...G.UU..G.UAUGU.
>A.immersus.1 X99089.1/298-417
..ACAUAC.GG.C.C.AU.AGA....UU.G.A.A.G...AA..........U.AU.A...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.CAUAGUCAA.G..
...............CUUCUAA.U.C..G...CC..UCGUUA..GUACUGCGG..UGGGU
GAC.C.ACACG.GGA...A..UCCGA....GG.U...G.CU..G.UAUGCU
>T.hiemalis.1 X00068.1/1-119
..AUCUGG.GG.C.C.AU.ACC....AC.A.G.U.U...AA..........A.UC.A...
.......C..CGC....A.UC....CCGUCU.......GA.UCUGC.GA.AGUUAA.G..
...............CACUGUA.G.G..G...CC..GAGUCA..GUAGUGCGG..UGGGG
GAC.C.ACGCG.CGA...A..UACUC...UGG.U...G.CC..C.CAGGU.
>E.festucae.1 AB205145.1/27903-27784
..ACAUAC.GA.C.C.AC.AGC....CG.C.C.A.G...CC..........A.AA.U...
.......C..CGG....A.UC....CCGUCC.......GA.UCUCC.GCUAGAUAA.U..
...............CUGGCGA.G.C..G...CU..AGAUUA..GUAGUUGAG..UCGGU
GAC.G.AUCAG.CGA...A..UACCU....AG.U...G.UU..G.UAUGUU
>A.persicinum.1 X00865.1/1-119
..ACAUAC.GA.C.C.AU.AGA....CG.C.U.A.G...AA..........A.AU.A...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.CAUAGUCAA.G..
...............CUGGCGA.U.C..G...GC..GGAUUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A..UACCU....GC.U...G.UU..G.UAUGU.
>A.persicinum.2 X00866.1/1-119
..ACAUAC.GA.C.C.AU.AGG....CG.C.U.A.G...AA..........A.AU.A...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.CAUAGUCAA.G..
...............CUGGCGA.C.C..G...GC..UGAUUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A..UACCG....GC.U...G.UU..G.UAUGU.
>A.chrysogenum.1 X00867.1/1-119
..ACAUAC.GA.C.C.AU.ACC....UA.G.U.G.G...AA..........A.AU.A...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.CAUAGUCAA.G..
...............CCGCUAA.G.G..G...GC..UGAUUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A..UACCG....GC.U...G.UU..G.UAUGU.
>A.persicinum.3 X00864.1/1-119
..ACAUAC.GA.C.C.AU.AGC....UC.U.C.A.G...AG..........A.AC.U...
.......C..GGG....A.UC....CCGUCU.......GC.UCUCC.UGUAGAUAA.G..
...............CUGACAA.G.C..G...GC..CGAUUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A..UACCG....GC.U...G.UU..G.UAUGU.
>F.pseudograminearum.1 AY924903.1/1-119
..ACAUAC.GG.C.C.AA.AGC....UC.G.U.A.G...AG..........A.AU.A...
.......C..GGG....G.UC....CCGUCC.......GC.UCCCC.CAUCGUCAA.G..
...............CUGCGAA.G.C..G...CU..GGAUUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A..UCCCC....AG.U...G.UU..G.UAUGU.
>F.pseudograminearum.2 AY924923.1/1-119
..ACAUAC.GG.C.C.AU.AAC....UA.U.C.A.G...AU..........A.AC.U...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.GUUCGAUAA.A..
...............CUGAUAA.G.U..G...CU..GAAUUA..GUAGUUAGG..UCAGU
AAC.G.ACCAG.CGA...A..UCCUC....AG.U...G.UU..A.UAUGU.
>N.crassa.1 M29278.1/713-832
..ACAUAC.GG.C.C.AU.AGA....UG.G.U.G.G...AA..........A.AC.U...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.CAUAGAUAA.G..
...............CCACCAA.U.C..G...CU..UGACUA..GUAGUUGGG..UCGGU
GAC.G.ACCAG.CGA...A...UCCC....AG.G.U.G.CU..G.UAUGUU
>N.crassa.2 M11398.1/749-868
..AUAUAC.GG.C.U.AU.AGA....UG.G.U.A.G...AA..........A.AU.U...
.......C..GGG....A.UC....CUAUCC.......AU.UUUCC.UAUAAAUAA.G..
...............CUACUAA.U.U..A...CU..UAACUA..GUAGUUAGG..UUGGU
GAC.G.AUUAG.CGA...A..UCCUA....AG.U...G.UU..G.UAUAUU
>N.africana.1 AY924945.1/1-119
..ACAUAC.GA.C.C.AU.AGG....CA.C.U.U.G...AA..........A.AC.U...
.......C..GGG....A.UC....CCGUCC.......GC.UCUCC.GAUCGAUAA.G..
...............CCAGUGA.C.C..G...CC..AGGCCA..GUAGUCGGU..UCGGU
GAC.G.GCCGG.CGA...A..UACCU....GG.U...G.UU..G.UAUGU.
>N.crassa.3 M11398.1/1543-1662
..AUAUAC.GG.C.U.AU.AGA....UG.G.U.A.G...AA..........A.AU.U...
.......C..AGG....A.UC....CCGUCC.......GC.UCUCC.UAUAGAUAA.G..
...............CUACUAA.U.C..G...CU..UAAUUA..AUAGUUAGG..UCAGU
AAC.G.ACCAG.CGA...A..UCCUA....GG.U...G.CU..G.UAUGUU
>Y.lipolytica.1 D10536.1/1-119
..RGUUAC.GG.C.C.AU.AUC....CU.G.G.U.G...AA..........A.AU.A...
.......C..CGC....U.UC....CCGUCC.......GA.UCAGC.CAUAGUCAA.G..
...............CACCAGA.G.A..G...CC..UAGUUA..GUAUUCUAG..UGGGA
GAC.C.AUAGG.AGA...A..UCCUG....GG.U...G.CU..G.UAAUU.
>C.jadinii.1 K01050.1/1-121
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.CU....CCGUCC.......GA.UCAACUGU.AGUUAA.G..
...............CUGCUAA.G.A..G...CC..UGAUCGA.GUAGUGUAG..UGGGU
GAC.C.AUACG.CGA...A..ACUCA....GG.U...G.CU..G.CAAUCU
>P.membranifaciens.1 M19950.1/1-120
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACUGU.AGUUAA.G..
...............CUGCUAA.G.A..G...CC..UGACCGA.GUAGUGUAG..AGGGC
GAC.C.AUACG.CGA...A..ACUCA....GG.U...G.CU..G.CAAUC.
>S.cerevisiae.1 M24957.1/152-36
..GGUUGC.GG.C.C.AU.AUC....UA.C.C.A.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACUGU.AGUUAA.G..
...............CUGGUAA.G.A..G...CC..UGACCGA.GUAGUGUA....GUGG
GUA.C.UGA...ACA...U...GUCU....GG.A.C.C.CU..G.CCCUCA
>Z.hellenicus.1 D10530.1/1-120
..AGCUAC.GG.C.C.AU.AUC....CA.G.A.U.G...AA..........A.AU.A...
.......A..GAC....U.UC....CCGUCC.......GA.UCAGU.CCUAUUCAA.G..
...............CAUCUGA.G.A..G...CC..UUACUAA.GUACUAUAG..UGGGU
GAC.C.AUAUG.GGA...A..CUGAA....GG.U...G.CU..G.UAGUU.
>C.antarctica.1 X00070.1/1-118
..AUCUGC.GG.C.C.AU.AGA....AC.C.U.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.G..
...............CAAGGUA.U.C..G...CC..UAGUCA..GUACUGCGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.CU..G.CAGUU.
>C.cylindracea.1 D10534.1/1-121
..AGCUAC.GG.C.C.AU.AUC....UA.G.C.A.G...UC..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACAGU.AGUGAA.U..
...............CUGCUAA.G.A..G...CC..UGACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUCA....GG.U...G.CU..G.UAGUUU
>C.melibiosica.1 D10526.1/1-121
..GGUUGC.GG.C.C.AU.ACC....AA.G.U.G.G...AA..........A.AU.A...
.......C..UGU....U.UC....CCGUCC.......GA.UCAAC.GUUAGUCAA.G..
...............CCACUUA.G.G..G...CC..ACAGUGA.GUAAUACAG..UGGGA
GAC.C.AUGUG.UGA...A..AUUGU....GG.U...G.CU..G.CAAUCU
>C.parapsilosis.1 D10535.1/1-121
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACAGU.AGUUAA.G..
...............CUGCUAA.G.A..G...CG..AGACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUCU....CG.U...G.CU..G.CAAUCU
>C.magnoliae.1 D10532.1/1-120
..AGCUGC.GG.C.C.AA.ACC....CA.G.G.U.G...AA..........U.AC.A...
.......A..GAC....U.UC....CCGUCC.......GA.UCAGU.CCUAUUUAA.A..
...............CACCUGA.G.G..G...CC..UUACCAA.GUAUUGUAG..UGGGA
GAC.C.AUACG.AGA...A..CAGAA....GG.U...G.CU..G.CAGUU.
>C.rugosa.1 D10528.1/1-121
..GGUUGC.GG.C.C.AU.ACC....UA.G.U.A.G...AA..........A.GC.A...
.......C..CAU....U.UC....CCGUCC.......GA.UCAAUUGC.AGUUAA.G..
...............CUACUAA.G.G..G...UC..UGAUUGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..AUUCA....GA.U...G.CU..G.CAAUCU
>C.azyma.1 D10525.1/1-120
..GCCUAC.GG.U.C.AU.AUC....AA.U.G.C.G...AA..........U.AU.A...
.......C..GAU....U.UC....CCGUCU.......GA.UCAAU.CAUAGUCAA.A..
...............CGCGUUA.G.A..G...CC..ACAUUCA.GUAUUACGG..UGGGA
GAC.C.ACGUG.AGA...A..CGGGU....GG.U...A.CU..G.AAGGU.
>C.diversa.1 D10527.1/1-120
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.G.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACUGC.AGUUAA.G..
...............CCGCUGA.G.A..G...CC..UGACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUCA....GG.U...G.CU..G.CAAUC.
>C.zeylanoides.1 D10529.1/1-121
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACUGU.AGUUAA.G..
...............CUGCUAA.G.A..G...CG..AGACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUCU....CG.U...G.CU..G.CAAUCU
>C.albicans.1 X16634.1/937-1057
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.CC....CCGUUC.......GA.UCAACCGU.AGUUAA.G..
...............CUGCUAA.G.A..G...CA..AUACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUAU....UG.U...G.CU..G.CAAUCU
>C.rugopelliculosa.1 D10533.1/1-120
..GGUUGC.GG.C.C.AU.AUC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CGU....U.UC....CCGUCC.......GA.UCAACUGC.AGUUAA.G..
...............CUGCUAA.G.A..G...CC..UGACCGA.GUAGUGUAG..UGGGA
GAC.C.AUACG.CGA...A..ACUCA....GG.U...G.CU..G.CAAUC.
>P.carinii.1 M28193.1/1-119
..AGUUAC.GG.C.C.AU.ACC....UC.A.G.A.G...AA..........U.AU.A...
.......C..CGU....A.UC....CCGUUC.......GA.UCUGC.GA.AGUUAA.G..
...............CUCUGAA.G.G..G...CG..UCGUCA..GUACUAUAG..UGGGU
GAC.C.AUAUG.GGA...A..UACGA....CG.U...G.CU..G.UAGCUU
>S.pombe.1 K00569.1/51-169
..GUCUAC.GG.C.C.AU.ACC....UA.G.G.C.G...AA..........A.AC.A...
.......C..CAG....U.UC....CCGUCC.......GA.UCACU.GC.AGUUAA.G..
...............CGUCUGA.G.G..G...CC..UCGUUA..GUACUAUGG..UUGGA
GAC.A.ACAUG.GGA...A..UCCGG....GG.U...G.CU..G.UAGGCU
>T.deformans.1 M58385.1/5-116
......GC.GG.C.C.AU.ACC....UC.C.A.U.G...AA..........A.AU.A...
.......C..UGC....U.UC....CCGUCC.......GA.UCAGC.AA.AGUCAA.G..
...............CAUGGAA.G.G..G...AU..UGGGUUA.GUACUAUCG..UGGGA
GAC.C.AGAUG.GGA...A...UCCG....GG.U.U.G.CU..G.CA....
>T.lanuginosus.1 X16688.1/41-159
..ACAUGC.GA.C.C.AU.AGG....GU.G.U.G.G...AA..........A.AC.A...
.......G..GGC....U.UC....CCGUCC.......GC.UCAGC.CGUACUUAA.G..
...............CCACACG.C.C..G...GC..UGGUUA..GUAGUUGGG..UGGGU
GAC.C.ACCAG.CGA...A..UCCCA....GC.U...G.UU..G.CAUGU.
>A.edulis.1 K03161.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.G.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCU.......GA.UCUGC.GC.AGUUAA.A..
...............CACAGUG.C.C..G...CC..UAGUUA..GUACCAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>L.pyriforme.1 M58384.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..AGGGG
GAC.C.ACGCG.GGA...A...UCUU....GG.G.U.G.CU..G.UGGUU.
>P.ostreatus.1 K03168.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCU.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CU..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>C.radiata.1 X00074.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>C.cinerea.1 K02344.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CU..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>T.matsutake.1 Z49275.1/645-762
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>Auricularia_auricula.1 K03160.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..UGC....A.UC....CCGUCC.......GA.UCUGC.AA.AGUUAA.C..
...............CAGAGUA.C.C..G...CC..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>E.glandulosa.1 M58368.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..UGC....A.GC....CCGUCC.......GA.UCUGC.AA.AGUUAA.C..
...............CAGAGUA.C.C..G...CU..CAGUUA..GUACCAUGG..UGGGG
GAC.C.AUGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>T.fusisporus.1 M35578.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.U.C.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CGGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>T.violea.1 M35576.1/1-118
..AUCUUC.GG.C.C.AU.AGG....AC.A.G.A.G...AA..........A.AU.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUCAA.G..
...............CUCUGUA.C.C..G...CU..UAGUUA..GUACCAUAG..UGGGG
GAC.C.AUAUG.GGA...A..UCCUG....AG.U...G.CU..G.AAGUU.
>H.paradoxa.1 X73890.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.AC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>G.applanatum.1 X73589.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.C.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.C..
...............CGGAGUG.C.C..G...CC..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>B.adusta.1 X06854.1/5-111
......AC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.C...........
>R.cyanoxantha.1 X01570.1/1-119
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUUC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUUU
>D.deliquescens.1 X00073.1/1-117
..AUCCAC.GG.C.C.AU.AGG....AC.A.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.G..AGUUAA.C..
...............CAGUGUG.C.C..G...CC..CGGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A...UCCU....GG.G.U.G.CU..G.UGGUU.
>F.capsuligenum.1 X06851.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.AC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.CU..G.UGGUU.
>S.pallida.1 M58383.1/4-115
.....CAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGAGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.CU..G.UG....
>F.depauperata.1 L79956.1/1-118
..AUCCUC.GG.C.C.AU.AGCCU..UU.G.C.A.U...GA..........A.AU.A...
.......C..CAC....G.UC....CCGUCC.......GA.UCCGU.GA.AGUCAA.G..
...............UUGCAUA.U.C..G...CU..CGGUUA..GUACCAAGG..UGGGG
GAC.C.ACUUG.GGA...A...UCCC....GG.G.U.G.CC..G.AGG...
>C.gattii.1 DQ007965.1/1269-1387
..AUCCAC.GG.C.C.AU.AGC....CU.U.C.A.U...AC..........A.GC.A...
.......C..CCU....G.CC....CCGUCC.......GA.UCCAG.GA.AGUUAA.G..
...............CUGAAGA.G.C..G...CU..CGGUUA..GUACCACGG..UGGGG
GAC.C.ACGUG.GGA...A...UCCC....GG.G.U.G.CC..G.UGGUUC
>T.mesenterica.1 X06852.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.U.C.U.G...AA..........A.AU.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUCAA.G..
...............CCGAGUA.C.C..G...CU..CAGUUA..GUACCACGG..UGGGG
GAC.C.ACGUG.GGA...A..UCCUG....GG.U...G.CU..G.UGGUU.
>T.papilionaceus.1 X67494.1/1-118
..AUCCUC.GG.C.C.AU.AGA....AU.G.A.C.G...AA..........A.AC.G...
.......A..CGC....G.UC....CCGUCC.......GA.UCUGC.GA.AUCUAA.G..
...............CGUCGUA.U.C..G...CU..AGGUUA..GUACCAAGG..UGGGG
GAC.C.ACUUG.GGA...A..UCCCU....AG.U...G.CC..G.AGGUU.
>A.solani.1 M35573.1/1-119
..AGGUGC.GA.C.C.AU.ACC....GU.G.U.U.G...AA..........A.AU.U...
.......C..UGC....A.UC....CCGUCC.......GA.UCUGC.AA.AGACAA.G..
...............CAACACA.G.G..G...CC..CAGUCA..GUAGUGCGG..UGGGU
GAC.C.ACGUG.CGA...A..UACUG...UGG.U...G.UU..G.CACUU.
>P.faginea.1 M35574.1/1-119
..AUGUGC.GA.C.C.AU.ACC....AA.G.C.U.G...AA..........A.AU.A...
.......C..UGC....A.UC....CCGUCU.......GA.UCUGC.AC.AGUCAA.G..
...............CAGCUUA.G.G..G...CC..CAGUCA..GUAGUGCGG..UGGGG
GAC.C.AUGCG.CGA...A..CAUUG...UGG.U...G.UU..G.CACUU.
>M.violaceum.1 X06847.1/1-119
..AUCUGC.GG.C.C.AU.ACC....GC.G.C.U.G...AA..........C.GU.U...
.......C..CGC....G.UC....UCGUCC.......GA.UCCGC.GC.AGACAA.G..
...............CAUCGCA.G.G..G...GC..CAGAGA..GUAUUGACG..UGGGU
GAC.C.AGUCG.AGA...A..CACUG...UGC.U...G.CC..G.CAGGU.
>C.peniophorae.1 M35571.1/1-119
..AUCUGC.GG.C.C.AU.ACC....GU.G.A.U.G...AA..........C.AU.U...
.......C..CGC....G.UC....CCGUCC.......GA.UCCGC.GC.AGACAA.G..
...............CAUCACA.G.G..G...GC..CAGAGA..GUAUUGACG..UGGGU
GAC.C.AGUCG.AGA...A..CACUG...UGC.U...G.CC..G.CAGGU.
>R.toruloides.1 X06848.1/1-119
..AUCUGC.GG.C.C.AU.ACC....GC.G.A.U.G...AA..........C.AC.A...
.......C..CGC....G.UC....UCGUCC.......GA.UCCGC.GA.AGUUAA.G..
...............CAUCGCA.G.G..G...GC..CAGAGA..GUAUUGCCG..UGGGU
GAC.C.AGGCG.AGA...A..CACUG...UGC.U...G.CC..G.CAGGU.
>S.salmonicolor.1 X06849.1/1-119
..AUCUGC.GG.C.C.AU.ACC....GC.G.A.U.G...AA..........C.CC.U...
.......C..CGC....G.UC....UCGUCC.......GA.UCCGC.GC.AGAUAA.G..
...............CAUCGCA.G.G..G...GC..CAGAGA..GUAUUGACG..UGGGU
GAC.C.AGUCG.AGA...A..CACUG...UGC.U...G.CC..G.CAGGU.
>H.purpureum.1 X00067.1/1-119
..AUCUGG.GG.C.C.AU.ACC....AC.A.G.C.C...GA..........A.UC.A...
.......C..CGC....A.UC....CCGUUC.......GA.UCUGC.GC.AGUUAA.A..
...............UGCUGUA.G.G..G...CC..GAGUCA..GUAGUGCGG..UGGGG
GAC.C.ACGCG.CGA...A..UACUC...UGG.U...G.CC..C.CAGGU.
>E.sempervivi.1 X00574.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.C.C.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGGGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.CU..G.UGGUU.
>P.poarum.1 K03169.1/1-118
..AUCCAC.GG.C.C.AU.AGG....AC.C.U.U.G...AA..........A.AC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CAGGGUG.C.C..G...CC..UAGUUA..GUACCACGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUA....GG.U...G.CU..G.UGGUU.
>S.carestianum.1 M35572.1/1-119
..AUCUGG.GG.C.C.AU.ACC....AC.A.G.U.G...AA..........C.AC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AGUUAA.C..
...............CACUGUA.G.G..G...CC..GAGUCA..GUAGUGCGG..UGGGG
GAC.C.ACGCG.CGA...A..UACUC...UGG.U...G.CC..C.CAGGU.
>E.vaccinii.1 X00069.1/1-118
..AUCUGC.GG.C.C.AU.AGA....AC.C.G.U.G...AA..........A.AU.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUCAA.G..
...............CACGGUA.U.C..G...CC..UAGUCA..GUACUGCGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....GG.U...G.CU..G.CAGUU.
>T.anomala.1 X00072.1/1-118
..AUCCGC.GG.C.C.AU.AGG....AU.C.A.G.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.G..
...............CCUGAUA.C.C..G...CC..GAGUUA..GUACUAAGG..UAGGG
GAC.U.ACUUG.GGA...A..UCCUG....GG.U...G.CU..G.CGGUU.
>M.juglandis.1 X00575.1/1-121
..AUCCAC.GG.C.C.AU.AGG....AC.A.C.A.G...AA..........A.AC.A...
.......U..CGC....A.UC....CCGUCC.......GA.UCUGC.GC.AAUCAA.G..
...............CUGUGUA.C.C..G...CC..CAGUCA..GUACCGGAG..UGGGG
GAC.C.AUCCG.GGA...A..UCCUG.CCAGG.U...G.CU..G.UGGUU.
>T.controversa.1 X00071.1/1-118
..AUCUGC.GG.C.C.AU.AGA....AC.C.U.U.G...AA..........A.GC.A...
.......C..CGC....A.UC....CCGUCC.......GA.UCUGC.GA.AGUUAA.C..
...............CAAGGUA.U.C..G...CU..CAGUUA..GUACUGCGG..UGGGG
GAC.C.ACGCG.GGA...A..UCCUG....AG.U...G.CU..G.CAGUU.
>B.magnus.1 M36313.1/2-120
..AGCAUC.GG.C.C.AU.ACA....UA.C.C.A.G...AA..........A.AU.A...
.......C..CGG....A.UC....CCGUCC.......GA.UCUCC.GA.AGUCAA.A..
...............CUGGUAA.U.G..G...CC..UAGUCA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGA...A..UACUA....GG.U...G.CU..G.AUGUUU
>C.stellatus.1 M36316.1/2-120
..UCUUAC.GG.C.C.AU.UCA....CA.C.C.A.G...AA..........A.GC.A...
.......C..CAA....A.UC....CCGUCC.......GA.UCUUU.GA.AGUUAA.G..
...............CUGGUGA.U.G..G...CG..UCGUCA..GUACUGUGG..UGGGG
GAC.C.ACACG.GGA...A..UACGG....CG.U...G.CC..G.UAGGUC
>G.hibernus.1 M36315.1/3-121
..UCUUAC.GG.C.C.AU.UCA....CA.C.C.A.G...AA..........A.GC.A...
.......C..CAA....A.UC....CCGUCC.......GA.UCUUU.GA.AGUUAA.G..
...............CUGGUGA.U.G..G...CG..UCGUCA..GUACUGUGG..UGGGG
GAC.C.ACACG.GGA...A..UACGG....CG.U...G.CC..G.UAAGUC
>S.culisetae.1 M36314.1/2-120
..UCCUAC.GG.C.C.AU.ACA....CA.C.C.A.G...AA..........A.GC.A...
.......C..CAA....A.UC....CCGUCC.......GA.UCUUU.GA.AGUUAA.G..
...............CUGGUGA.U.G..G...CG..UCGUCA..GUACUGUGG..UGGGG
GAC.C.ACACG.GGA...A..UACGA....UG.U...G.CC..G.UAAGUU
>C.mojavensis.1 M36309.1/1-120
..AGCUGG.GG.C.C.AU.AUG....AA.C.C.U.A...UA..........A.GU.A...
.......C..CGC....A.UC....CCGUCCC......GA.UCUGC.GA.AGUCAA.G..
...............CAGGUUA.C.A..G...CU..CGGUUA..GUACUAUGA..UGGGA
GAC.C.ACAUG.GGA...A..UACCG....GG.U...G.UC..C.CAGCUU
>D.acuminosporus.1 M36307.1/1-119
..AGUUAC.GA.C.C.AU.AUC....AA.C.U.U.G...AA..........A.GC.A...
.......C..CAC....A.CC....CCGUCA.......GA.UCUGU.GA.AGUUAA.G..
...............CAAGUUA.G.A..G...CU..UCGUUA..GUAGUUUGG..UGGGG
GAC.C.ACAAG.CGA...A..UACGA....AG.U...G.CC..G.UAGCUU
>L.macrospora.1 M36308.1/1-119
..AGUAAC.GG.C.C.AU.AUC....AG.C.U.U.G...AA..........A.GC.A...
.......C..CGC....A.AC....CCGUCA.......GA.UCUGC.GA.AGUUAA.G..
...............CAAGCUA.G.A..G...CU..AGGUUA..GUACUAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UACUU....AG.U...G.UC..G.UUAUUU
>M.formosensis.1 M36312.1/2-120
..AAUUAC.GG.C.C.AU.ACA....CA.G.G.A.G...AA..........A.GC.U...
.......C..CGC....A.UC....CCGUUC.......GA.UCUGC.GC.AGAUAA.C..
...............CUCCUGA.U.G..G...CA..GGGUCA..GUACUAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UACCC....UG.U...G.CU..G.UAAUUU
>B.trispora.1 M36311.1/2-120
..AGCUAC.GG.C.C.AU.AUA....AU.A.C.C.G...AA..........A.GC.A...
.......C..CGG....A.UC....CCGUCC.......GA.UCUCC.GC.AGUUAA.A..
...............CGGUAUA.U.A..G...AU..CAGUCA..GUACUAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UACUG....GU.U...G.CU..G.UAGUUU
>C.elegans.1 M36310.1/2-120
..AGUUAC.GG.C.C.AC.AUC....AU.C.G.U.G...AA..........A.AG.A...
.......C..CAA....A.UC....CCGUCC.......GA.UCUUU.GC.AGUCAA.A..
...............CACGAUC.G.A..G...CU..UCGUCA..GUACUAUGG..UGAGA
GAU.C.ACAUG.GGA...A..UACGA....AG.U...G.CU..G.UAAUUU
>P.blakesleeanus.1 V01120.1/2-120
..AUCUAC.GG.C.C.AU.ACA....GA.U.A.G.U...AA..........C.AC.A...
.......C..CGG....A.UC....CCGUCU.......GA.UCUCC.GC.AGUUAA.G..
...............UCUCUCC.U.G..G...UA..GCGUCA..GUACUAUGG..UGGGG
GAC.C.ACAUG.GGA...A..UACGC....UA.U...G.UC..G.UAGGUU
>N.ceranae.1 EF091879.1/123-5
..AGCUAC.GG.C.C.AU.AUC....UA.C.U.G.U...AA..........A.AC.A...
.......C..CGG....A.AC....UCGUCA.......GC.UCUCC.GA.AGUUAA.G..
...............CCAGUAA.G.A..G...CC..UUGUUA..GUACUGAGA..UGGGA
AAC.C.GCUCG.GAA...A..AGCUA....GG.U...G.CU..G.UAGUUU
>E.cuniculi.1 AJ005582.1/157-275
..GAUUAC.GG.C.C.AU.AUC....CA.C.G.G.A...AA..........A.GC.A...
.......C..CGG....A.AC....UCGUCA.......GA.UCUCC.GA.AGUUAA.G..
...............CCCGUGC.G.A..G...CC..UGGGUA..GUACUGAGA..AGGGA
GAC.C.GCUCG.GGA...A..UACCG....GG.U...G.CC..G.UAAUCU
>C.paradoxa.1 M32451.1/1-117
..CCUGGU.GC.U.U.AU.UGC....GU.G.G.U.G...GA..........A.CC.A...
.......CA.CCG....A.UC.....CAUACC......GA.ACUCG.GU.UGUGAA.A..
...............CAUUACU.G.C..G...GC..GACAA....UACUUGAA...GGGU
AAC.U.UUCUG.GAA...A...GAUA....GC.U.U.A.GU..G.CCAGGA
>C.paradoxa.2 M32450.1/1-119
..GUGUAC.GG.C.U.AU.ACU....AC.C.G.G.A...AA..........A.GC.G...
.......C..CCG....U.UC....CCGUCC.......GA.UUACG.AG.AGCCUA.G..
...............CCCGGUC.A.G..G...CC..CGACUA..GUACUAGGG..UGGGG
GAC.C.ACCUG.GGA...A..CAUCG....GG.U...G.CU..G.UACACU
>A.parasiticum.1 M36306.1/1-119
..GGUUAC.GG.C.C.AU.ACC....UA.G.C.A.G...AA..........A.GC.A...
.......C..CCC....A.UC....UCGUCC.......GA.UCUGG.GA.AGUUAA.A..
...............CUGCUAU.G.G..G...CG..UGGUUA..GUACUGCGG..UGGGG
GAC.C.ACGCG.GGA...A..UACCA....CG.U...G.CU..G.UAAUCU
>E.albidus.1 X03911.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.GC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.CU..G.UAGACU
>S.japonica.1 X00997.1/1-119
..GCCUAC.GG.C.C.AU.ACC....AU.G.C.U.G...AA..........U.AC.A...
.......C..CCG....U.UC....UCGUCC.......GA.UCACG.GA.AGUUAA.G..
...............CAGCAUC.G.G..G...CA..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCG....UG.U...G.CA..G.UAGGCU
>P.brevicirris.1 X00996.1/1-119
..GCCUAC.GG.C.C.AU.ACU....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCU.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.CU..G.UAGGUU
>Artemia.1 X14817.1/224-341
..ACCAAC.GG.C.C.AU.ACC....AU.G.U.U.G...AA..........A.GU.A...
.......C..CCA....G.UC....UCGUCA.......GA.UCCUG.G..AGUCCC.A..
...............CAACGUC.G.G..G...CC..CGGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCG....GG.U...G.UU..G.UUGGCA
>A.aquaticus.2 AJ243001.2/1-116
..GUCAAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.GC.A...
.......C..CAC....U.UC....UCGUCC.......GA.UCAGC.GA.AGUUAA.G..
...............CAACGUU.G.G..G...UC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..CACCA....GA.U...G.CU..G.UUG...
>C.finmarchicus.1 X06056.1/924-806
..GUCUAG.GG.C.C.AU.AUC....AU.G.U.U.G...AA..........A.AC.A...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGUUAA.G..
...............CAACAUU.G.A..G...UU..GUGUUA..GUACUUGGA..UGGGU
GAC.C.GCUUG.GGA...A..UACAC....AA.U...G.UC..C.UAGACA
>P.rufipes.1 X83208.1/1-119
..GUCAAC.GG.C.C.AU.AGC....AC.G.C.U.G...UA..........A.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAGCGUU.G.C..G...CG..CGGUUA..GUACCUGGA..UGGGU
GAC.C.GCUUG.GGA...A..CACCG....CG.U...G.CC..G.UUGACA
>D.melanogaster.1 M25016.1/1-119
..GCCAAC.GA.C.C.AU.ACC....AC.G.C.U.G...AA..........U.AC.A...
.......U..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AAUUAA.G..
...............CAGCGUC.GCG..G...GC..GGUUA...GUACUUAGA..UGGGG
GAC.C.GCUUG.GGA...A...CACC....GC.G.U.G.UU..G.UUGGCC
>S.cynthia.1 X13037.1/1-119
..GCCAAC.GU.C.C.AU.ACC....AU.G.U.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACAUC.G.G..G...CG..UAGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACUA....CG.U...G.AU..G.UUGGCU
>B.mori.1 M25201.1/1-119
..GCCAAC.GU.C.C.AU.ACC....AU.G.U.U.G...AA..........U.AC.A...
.......C..UGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACAUC.G.G..G...CG..UGGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCA....CG.U...G.AU..G.UUGGCU
>B.mori.2 M35394.1/1-119
..GCCAAC.GU.C.C.AU.ACC....AU.G.U.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACAUC.G.G..G...CG..UGGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCA....CG.U...G.AU..G.UUGGCU
>S.cynthia.2 K02354.1/1-118
..GCCAAC.GU.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CG..CGGUCA..GUACUUGGA..UGGGU
GAC.C.ACCUG.GGA...A..CACCG....CG.U...G.CC..G.UUGGC.
>A.pernyi.1 X13035.1/1-119
..GACAAC.GU.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CG..CGGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCG....CG.U...G.AC..G.UUGGCU
>A.domesticus.1 M16074.1/307-425
..GCCAAC.GU.C.C.AU.ACC....AC.G.U.U.G...AA..........A.GC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAGCGUC.G.G..G...CG..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CCCCG....CG.U...G.AC..G.UUGGCA
>A.magnoliae.1 X01518.1/1-119
..GGCAAC.GA.C.C.AU.ACC....AC.G.U.U.G...AA..........U.AC.A...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CG..UAGUUA..GUACUUGGA..UGGGU
GAC.C.GCUUG.GGA...A..CACUA....CG.U...G.CC..G.UUGGCA
>L.anatina.1 X06837.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.C.G.G.G...AA..........A.AA.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CCCGGUA.G.G..G...CC..AGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCU....GG.U...G.CU..G.UAGACU
>L.anatina.2 M35395.1/1-119
..GUCUAC.GA.C.C.AU.ACC....AC.G.U.U.G...AA..........A.GC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..AGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCU....GG.U...G.CC..G.UAGACA
>B.neritina.1 X06834.1/1-119
..GUUUAC.GG.C.C.AU.AUC....AC.G.U.U.G...AA..........A.AC.G...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGCUAA.G..
...............CAACGUC.G.A..G...CC..UGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.CU..G.UAGACU
>B.belcheri.1 X13034.1/1-119
..GCCUAC.GG.C.C.AU.AUC....AC.G.U.U.G...AG..........U.AC.A...
.......C..CCG....A.UC....UCGUUC.......GA.UCUCG.GA.AGUUAA.G..
...............CAACGUC.G.A..G...UC..CGGUCA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..CACCG....GG.A...G.UU..G.UAGGCA
>S.canicula.1 M24954.1/1-119
..GCCUAC.GG.C.C.AU.ACU....AG.U.C.U.G...AA..........A.AC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGAUUC.A.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.CA..G.UAGGCU
>D.oxyrinchus.1 DQ020568.1/1-118
..GCCUAC.GG.C.C.AU.ACU....AG.C.C.U.G...AA..........C.AC.G...
.......C..CCG....A.UC....CCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGUCA.G.G..C...CU..GGUUA...GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A...UACC....AG.G.U.G.CC..G.UAGGCU
>A.sturio.1 AJ744982.1/1-129
..ACCUUC.GG.C.C.AC.ACC....AC.U.U.U.G...AAUAAGCCUGAUC.UC.G...
.......C..CUG....A.UC....UCGUCU.......GA.UCUCA.GA.AGUGAA.A..
...............CAAUGUU.G.G..G...CU..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UAUCA....AG.U...G.CU..G.UAGGCA
>A.sturio.2 AJ744985.1/1-109
..GCCUGC.GG.C.C.AC.ACC....AC.U.U.U.G...AA..........U.AA.G...
.......C..CUG....A.......................UCUCA.GA.AGUGAA.A..
...............CAAUGUU.G.G..G...CU..UGGUUA..GUACUUGGA..UGGGA
AAC.C.GCCUG.GGA...A..UAUCA....AG.U...G.CU..G.UAGGCA
>A.sinensis.1 AJ745020.1/1-119
..ACCUGC.AG.C.C.AC.ACC....AC.C.U.U.G...AA..........U.AA.G...
.......C..CUG....A.UC....UCAUCU.......GA.UCUCA.GA.AGCUAA.G..
...............CAACGUU.G.G..G...UU..UGGUUA..GUACUUGGA..UGGGA
UUC.C.ACCUG.GGA...A..UAUCA....AG.U...G.CU..G.UAGGCA
>M.fossilis.1 V00647.1/1-119
..GCUUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AG..........C.AC.G...
.......C..CCG....A.UC....UCGUCC.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.U.GCCUG.GGA...A..UACCA....GG.U...G.UU..G.UAAGCU
>M.fossilis.2 V00648.1/1-119
..GCUUAC.GG.C.C.AC.ACC....AA.C.C.U.G...AG..........C.AA.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCCAA.G..
...............CAGGGUU.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.U.GCCUG.GGA...A..UACCA....GG.U...G.UU..G.UAAGCU
>C.carpio.1 AB015590.1/1-119
..GCUUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AG..........C.AC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.CU..G.UAAGCU
>E.calabaricus.1 DQ867109.1/1-117
..GCUUAC.GG.C.C.AU.ACC....AG.C.C.U.G...UA..........C....G...
.......C..CCG....A.UC....UCGUCC.......GA.UCCUG.AA.AAAUAA.A..
...............CAUGCUU.G.G..G...CU..UGGCCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCG....AG.U...G.CU..G.UAAGCU
>E.calabaricus.2 DQ867109.1/483-591
..GCUUAC.GG.C.C.AC.AUC....AG.U.G.U.G...AA..........A.GU.G...
.......U..CUG....A.......................UCUUC.GA.AGUUAA.A..
...............CACGCCU.G.U..G...CU..CGGCUA..GUACGUGGA..UGGGA
AAU.C.GCCUG.AGA...A...CCCC....AG.G.U.G.CU..A.UAAGCU
>E.calabaricus.3 DQ867108.1/1-118
..GCUUAC.GG.C.C.AU.ACC....AG.C.C.U.G...............U.AC.G...
.......C..CCG....A.UC....UCGUCC.......GA.UCGCG.GA.AGAUAA.A..
..............ACGCGUUU.G.G..U...CU..UGGCCA..GUACUUGGA..UGGGA
GAC.C.ACAUA.GGA...A..CCCCG....AG.U...G.CU..G.ACAGCU
>E.calabaricus.4 DQ867109.1/245-353
..GCUUAC.GG.C.C.AC.ACC....AG.U.G.U.G...AA..........A.GC.A...
.......U..CUG....A.......................UCUCA.GA.AGCUAA.A..
...............CACACUU.G.G..G...CU..CGAUCA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GAA...A..CACCG....AG.U...G.CU..G.UAAGCU
>X.Silurana.1 X12624.1/61-178
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........A.GC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGAC.G.G..G...CU..UGGUUA..GUACCUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UU..G.UAGGC.
>X.Silurana.2 X12622.1/1-118
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........A.GC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGAC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCU....GG.U...G.CU..G.UAGGC.
>X.laevis.1 K01537.1/51-169
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........A.GU.G...
.......C..CCG....A.UA....UCGUCU.......GA.UCUCG.GA.AGCCAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UC..G.UAGGCU
>X.borealis.1 V01425.1/590-708
..CCCUGC.GG.C.U.AC.ACC....CC.C.C.U.G...AA..........A.GA.G...
.......C..CUG....A.UC....UUGUCU.......GA.UCUCA.GA.AGCCAU.G..
...............CGGGGCC.G.A..C...CC..UGGUUA..GUACCUGGA..UGGGA
GAC.C.ACCUG.GGA...A...UACA....AG.G.U.G.UU..G.UAGUCU
>X.laevis.2 J01009.1/607-725
..GCCUAC.GG.C.C.AC.ACC....AC.C.C.U.G...AA..........A.GU.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCCAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UC..G.UAGGCU
>X.laevis.3 M10850.1/361-479
..GCCUAC.GG.C.C.AC.ACC....AC.C.C.U.G...AA..........A.GU.G...
.......C..CUG....A.UC....UCGUCU.......GA.UCUCA.GA.AGCGAU.A..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACCUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UC..G.UAGGCU
>X.laevis.4 J01012.1/1-119
..GCCUAC.GG.C.C.AC.ACC....AC.C.C.U.G...AA..........A.GU.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCGAU.C..
...............CAGGGCC.G.G..G...CC..UGGUUA..GUACCUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.UC..G.UAGGCU
>G.riobambae.1 M74438.1/534-648
..GUCUACUGG.C.C.CC.ACCCCCAAC.C.C.U.G...GG..........U.AC.U...
.......C..CCG....A.......................UCUCG.GA.AGCAAA.G..
...............CAGGGUCGG.G..C...UC..AGGCAA..CUACUUGGA..UGGGA
GAC.C.UCCUG.GGA...A...CACC....GA.G.U.G.CU..G.UAGACU
>P.waltl.1 X16851.1/1-119
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........U.GC.G...
.......C..CCG....A.UC....UCGUCC.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.CU..G.UAGGCA
>G.gallus.1 X00190.1/1-118
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...GA..........A.AC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CU..CGGUUA..GUACUUGGA..UGGGA
GAC.U.GCCUG.GGA...A..UACCG....AG.U...G.UC..G.UAGGC.
>I.iguana.1 M10817.1/1-119
..GCCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........C.AC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.CU..G.UAGGCU
>M.musculus.1 X71804.1/109-227
..GUCUAC.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........C.GC.G...
.......C..CCG....A.UC....UCGUCU.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.G..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.CU..G.UAGGCU
>H.sapiens.1 AL096764.11/46123-46004
..GUCUAU.GG.C.C.AU.ACC....AC.C.C.U.G...AA..........U.GU.G...
.......C..UUG....A.UC....UCAUCU.......GA.UCUCGUGA.AGCCAA.G..
...............CAGGGUG.G.G..G...CC..UAGUUA..GUACUUGGA..UGGGA
GAC.U.UCCUG.GGA...A...UAUA....AG.C.U.G.CU..G.UUGGCU
>H.sapiens.2 U89919.1/939-1056
..CUUUAC.GG.C.C.AC.ACC....AC.C.C.U.G...AA..........C.GC.A...
.......C..CGG....A.UC....UCGACU.......GA.CCUUG.AA.AGCUAA.G..
...............CAGGAUC.G.G..G...CC..UGGUUA..GUAUUGGGA..UGGCA
GAC.C.CCCUG.GAA...A...UACA....GG.G.U.G.CU..G..AAGGU
>H.sapiens.3 AJ508600.1/161-58
..GUCUAC.AG.C.C.AU.ACC....AU.C.C.U.G...AA..........C.AU.G...
.......C..CAG....A.UC....UUGUCU.......GA.CCUCU.GA.AGCUAA.G..
...............CAGGGUC.A.A..G...CC..UGGUUA..GUACUUGGG.......
............AGA...A....GCU....GG.U...G.UG..GCUAGACC
>L.camtschaticum.1 X04309.1/2-120
..GCCUAC.GA.C.C.AU.AUC....AC.C.C.U.G...AA..........U.GC.G...
.......C..CCG....A.UC....UCGUCC.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.A..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UU..G.UAGGCU
>L.camtschaticum.2 D00076.1/1-119
..GCCUAC.GA.C.C.AU.AUC....AC.C.C.U.G...AA..........U.AC.G...
.......C..CCG....A.UC....UCGUCC.......GA.UCUCG.GA.AGCUAA.G..
...............CAGGGUC.G.A..G...CC..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UU..G.UAGGCU
>O.dioica.1 AJ628165.1/1-119
..GCUUAG.CG.U.C.AU.ACC....GC.G.U.A.G...AA..........U.AA.A...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGUCAA.A..
...............CUACGAC.G.G..G...CG..GGGUUA..GUACUUACA..UGGGU
GAC.C.GGUUG.GGA...A..UACCU....CG.U...G.CG..C.UAAGCA
>H.roretzi.1 V00476.1/1-119
..AUCUAC.GG.C.C.AU.ACC....AC.A.U.U.G...AG..........A.GC.A...
.......C..CCG....A.UC....UCGUUC.......GA.UCUCG.GA.AGUUAA.G..
...............CAAUGUA.G.G..G...AU..CAGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACUG....GU.U...G.CU..G.UAGAAA
>A.equina.1 X05233.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.C.G.G.G...AA..........A.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CCCGGUA.G.G..G...CC..AGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCU....GG.U...G.CU..G.UAGACU
>N.dofleini.1 K02350.1/1-119
..GUCUAC.GA.C.C.AU.ACC....AC.A.A.U.G...AA..........C.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAUUGUC.G.G..G...CC..AGGAUA..GUACCUGGA..UGGGG
GAC.C.GCCUG.GGA...A..CGCCU....GG.U...G.UC..G.UAGACU
>S.saltatrix.1 K02349.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.G.A.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAUUGUC.G.G..G...CC..AGGAUA..GUACUUGGA..UGGGG
GAC.C.GCCUG.GGA...A..CUCCU....GG.U...G.CC..G.UAGACU
>C.quinquecirrha.1 K02348.1/1-119
..GCCUAC.GA.C.C.AU.ACC....AC.C.A.U.G...AG..........U.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GG.AGUCAA.G..
...............CAUGGUC.G.G..G...CC..GGGUCA..GUACCUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCU....GG.U...G.UU..G.UAGGCC
>A.aurita.1 X00991.1/1-118
..GCCUAC.GA.C.C.AU.ACC....AC.C.A.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............NAUGGUA.G.G..G...CC..GGGUCA..GUACCUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCC....GG.U...G.UU..G.UAGGC.
>A.rubens.1 X00992.1/1-119
..GUCUAC.AG.C.C.AU.ACU....AC.G.C.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCU.......GA.UCACC.GA.AGUUAA.G..
...............CAGCAUC.A.G..G...CC..CAGUCA..GUACUUGGA..UGGGA
GAC.C.UCCUG.GGA...A..UACUG....GG.U...G.CC..G.UAGACU
>P.pectinifera.1 X01003.1/1-119
..GUUUAC.GA.C.C.AU.ACU....AC.G.U.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CU..UGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCA....GG.U...G.UC..G.UAGGCU
>P.lividus.1 AJ417699.1/1-119
..GCCUAC.GA.C.C.AU.ACC....AU.G.C.U.G...AA..........U.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAGCAUA.G.G..G...CC..CGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.UU..G.UAGGCU
>Hemicentrotus.1 X01004.1/1-119
..GUUUAC.GA.C.C.AU.ACC....AU.G.C.U.G...AA..........U.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAGCAUA.G.G..G...CC..CGGUUA..GUACUUGGA..UGGGA
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.UU..G.UAGGCA
>S.oshimae.1 X01002.1/1-119
..GUUUAC.GA.C.C.AU.AUC....AC.G.U.U.G...AA..........U.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAGCGUC.G.A..G...CC..UAGUNA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACUA....GG.U...G.CC..G.UAGACU
>U.unicinctus.1 X00998.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.CU..G.UAGACU
>S.kowalevskii.1 X06836.1/1-119
..GCCUAC.GG.C.C.AU.ACC....AC.G.U.A.G...AA..........U.GC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CUGCGUC.G.G..G...CG..UGGUUA..GUACUUGCA..UGGGA
GAC.C.GGCUG.GGA...A..UACCA....CG.U...G.CU..G.UAGGCU
>D.misakiense.1 X06833.1/1-115
....GUAC.GA.U.C.AU.ACU....UG.G.C.C.G...UA..........A.GC.A...
.......C..CCG....U.UC....UCAGCC.......GA.CCACG.GA.AGUUAA.G..
...............CGGUUAU.A.G..G...CU..GUGUUA..GUACUUGGC..UGGGU
GAC.C.GCCUG.GGA...A..CUCAC....AG.U...G.UC..G.UACU..
>C.edule.1 AJ132198.1/1-116
..GUCUAC.GG.C.C.AU.AUC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.A..G...CC..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.CU..G.UAG...
>M.edulis.1 AJ312082.1/1-119
..GUCUAC.GA.C.C.AU.AUC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.A..G...CC..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCG....GG.U...G.UU..G.UAGACA
>S.officinalis.1 X05234.1/1-119
..GCUUAC.GG.C.C.AU.AUC....AC.G.C.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.ACACC.GA.AGUUAA.G..
...............CAACGUA.G.A..G...CC..UGGUGA..GUACUUGGA..UGGGU
GAC.C.GCUUG.GGA...A..UACCA....GG.U...G.CU..G.UAAGCA
>I.illecebrosus.1 X00993.1/1-119
..GCUUAC.GG.C.C.AU.AUC....AC.G.C.U.G...AA..........U.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUA.G.A..G...CC..UAGUCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACUA....GG.U...G.CU..G.UAAGCA
>O.vulgaris.1 X06835.1/1-119
..GCUUAC.GG.C.C.AU.AUG....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACAUC.G.A..G...CC..UAGUUA..GUACUUAGA..UGGGU
GAC.C.GCUUG.GGA...A..CCCUA....GG.U...G.CU..G.UAAGCA
>A.kurodai.1 X04305.1/1-118
..GGCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........C.CU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACGUC.G.G..G...CG..UGGUUA..GUACUUAGA..UGGGU
GAC.C.GCUUG.GGA...A..CACCA....CG.U...G.CU..G.UAGGC.
>A.rufus.1 J01888.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACGUC.G.G..G...CG..UGGUUA..GUACUUAGA..UGGGU
GAC.C.GCUUG.GGA...A..CACCA....CG.U...G.UU..G.UAGACA
>H.pomatia.1 J01889.1/1-119
..GUCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AU.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUCAA.G..
...............CAACGUC.G.G..G...CG..UGGUUA..GUACUUAGA..UGGGU
GAC.C.GCUUG.GGA...A..CACCA....CG.U...G.UU..G.UAGAUA
>A.lumbricoides.1 M27961.1/79-196
..GCUUAC.GG.C.C.AA.ACC....AC.G.U.U.G...AA..........A.GC.A...
.......C..GAC....A.UC....CCGUCC.......GA.UCUGU.CA.AGUUAA.G..
...............CAACGUU.G.G..G...CC..UGGUUA..GUACUUGGA..UCGGA
GAC.G.GCUUG.GGA...A..UCCCA....GG.U...G.CU..G.UAAGC.
>C.briggsae.1 X16225.1/825-943
..GCUUAC.GA.C.C.AU.AUC....AC.G.U.U.G...AA..........U.GC.A...
.......C..GCC....A.UC....CCGUCC.......GA.UCUGG.CA.AGUUAA.G..
...............CAACGUU.G.A..G...UC..CAGUUA..GUACUUGGA..UCGGA
GAC.G.GCCUG.GGA...A..UCCUG....GA.U...G.UU..G.UAAGCU
>M.arenaria.1 U42342.1/183-65
..GAUUAC.GA.C.C.AU.ACC....GC.G.U.U.G...AA..........A.GC.A...
.......C..GCC....A.UC....CCGUCC.......GA.UCUGG.CA.AGUUAA.G..
...............CAACGCU.G.G..G...CU..UCCUUA..GUACUUGGA..ACGGA
GAC.G.UCCUG.GGA...A..UCGGG....AG.U...G.UC..G.UAAUCU
>L.geniculatus.1 X00020.1/1-119
..GUCUAC.GA.C.C.AU.AUC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUC.G.A..G...CG..UGGUUA..GUACGUGGA..UGGGU
GAC.C.GCCUC.GGA...A..UACCA....CG.U...G.UU..G.UAGGCU
>E.gracile.1 X00022.1/1-119
..GGCAAC.GA.C.C.AU.ACC....AU.G.C.U.G...AA..........A.AU.A...
.......C..CAG....U.UC....CCGUCC.......GA.UCACU.GA.AGUCAA.G..
...............CAGCAUC.G.G..G...CC..CGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CACCG....GG.U...G.UC..G.UUGUCA
>T.adhaerens.1 X57691.1/1-116
....CUAC.GA.C.U.AU.AUG....AC.G.U.U.G...AA..........U.AU.A...
.......C..CCG....U.UC....UCGUCU.......GA.UUACG.GA.AGUUAA.G..
...............UAACGUC.G.A..G...UG..GGGUUA..GUACUUAGA..UGGGU
GAC.C.GCUUG.GGA...A..UACCU....CA.U...G.CC..G.UAGGC.
>P.reticulata.1 X01550.1/1-119
..GAUAGC.GU.C.C.AU.ACC....AC.A.C.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GC.AGUUAA.G..
...............CAGUGUC.G.G..G...CC..CAGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACUG....GG.U...G.UC..G.CUACCU
>D.japonica.1 X01551.1/1-119
..GUCGAC.GC.U.C.AU.ACU....AG.G.U.U.G...GG..........U.CC.A...
.......C..CCG....A.UC....UCGUUC.......GA.UCUCG.GC.AGUUAA.A..
...............CAACCUU.A.G..G...CC..UCGUUA..GUACUUGAA..UGCGU
GAG.C.GUCUG.GGA...A..UACGA....GG.U...G.GU..G.UCGACU
>H.panicea.1 X01534.1/1-119
..GCCUAC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCU.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUA.G.G..G...CC..UGCCCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CAGCA....GG.U...G.UU..G.UAGGCU
>H.perlevis.1 X01535.1/1-119
..GUCUAC.GA.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CGG....U.UC....UCGUCC.......GA.UCACC.GA.AGUUAA.G..
...............CAACGUA.G.G..G...CC..UGCCCA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..CAGCA....GG.U...G.UU..G.UAGACU
>H.oculata.1 X01536.1/1-119
..GCCUGC.GG.C.C.AU.ACC....AC.G.U.U.G...AA..........U.GC.A...
.......C..CGG....U.UC....CCAUCU.......GA.ACACC.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..AGCUUA..GUACCUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UCGCU....GG.U...G.CU..G.CAGGCU
>P.gouldii.1 X00994.1/1-119
..GCCUAC.GA.C.C.AU.ACC....AC.G.U.U.G...AA..........A.AC.A...
.......C..CAG....U.UC....UCGUCC.......GA.UCACU.GA.AGUUAA.G..
...............CAACGUC.G.G..G...CC..AGGUUA..GUACUUGGA..UGGGU
GAC.C.GCCUG.GGA...A..UACCU....GG.U...G.UU..G.UAGGCU
>P.umbilicalis.1 X13222.1/1-121
..ACGUGC.GG.C.C.AU.AGU....GCAG.G.A.A...CA..........U.GC.G...
.......C..CGA....A.AC....CCAUCCC......GA.AUUUC.GA.AGCUAA.G..
...............CUCCGCC.A.C..G...CA..CGAUUA..GUACUCUGG..AGGGG
GAC.C.UCAGU.GGA...A..UCUCG....UG.U...G.CC..G.CAUGUU
>P.purpurea.1 L07260.1/753-869
..UUUGGU.GC.C.A.AU.AGC....AC.A.G.U.G...GA..........A.CC.A...
.......CA.CCG....A..C....CCAUCUC......GA.ACUCG.GU.UGUUAA.A..
...............CGCUGUA.G.C..G...GC..AAGAA....UACUUAAG...GGGC
AGC.U.CUUUG.GGA...A...AGUA....GC.U.C.A.GU..G.CCAAAG
>P.tenera.1 X01000.1/1-121
..ACGUAC.GG.C.C.AU.AUC....CGAG.A.C.A...CG..........C.GU.A...
.......C..CGG....A.AC....CCAUUCC......GA.AUUCC.GA.AGUCAA.G..
...............CGUCCGC.G.A..G...UU..GGGUUA..GUAGUCUGG..UGAGG
GAU.C.ACAGG.CGA...A..CCCCC....AA.U...G.CU..G.UACGUC
>P.yezoensis.1 K02362.1/1-121
..ACGUAC.GG.C.C.AU.AUC....CGAG.A.C.A...CG..........C.GU.A...
.......C..CGG....A.AC....CCAUUCC......GA.AUUCC.GA.AGUCAA.G..
...............CGUCCGC.G.A..G...UU..GGGUUA..GUAAUCUGG..UGAAA
GAU.C.ACAGG.CGA...A..CCCCC....AA.U...G.CU..G.UACGUC
>C.caldarium.1 X68666.1/1-122
..ACGUUC.GG.U.C.AU.ACU....AG.U.GAC.A...CA..........U.GC.G...
.......C..CUG....A.AC....CCAUUUC......GA.AUUCA.GA.AGCUAA.G..
...............CGCCCUC.A.G..G...CU..UGGUUA..GUACUGAGG..UGAGG
GAU.CCACUCG.GGA...A..CCCCA....AG.U...G.CC..G.UACGUU
>B.ectocarpum.1 D00063.1/1-121
..ACAUAC.GA.C.C.AU.AGU....AC.GAG.G.A...CA..........U.GC.G...
.......C..AGG....A.GC....CCAUCUC......GA.ACUCC.UC.AGCUAA.A..
...............UCCCGUC.A.C..G...CA..CGCUUA..GUACUCCGG..AGGGG
GAC.C.ACGGU.GGA...A..UCGCG....UG.U...G.UC..G.UAUGUU
>G.amansii.1 X05527.1/1-120
..ACAUUC.GG.C.C.AU.ACU....AA.GUC.G.A...CA..........U.GU.A...
.......C..CCG....A.UC....CCAUCCC......GA.ACUCG.GA.AGUCAA.G..
...............UCGCUUC.A.G..G...CC..GGGUUA..GUACUGAGG..UGAGG
GAU.C.ACUCG.GGA...A..UCCCC....GG.U...G.CC..G.AAUGU.
>G.amansii.2 X05528.1/1-121
..ACAUUC.GG.C.C.AU.ACU....UG.GUA.G.A...UA..........U.GC.G...
.......C..CUU....A.UC....CCAUCCC......GA.ACUGA.GA.AGCUAA.G..
...............UCUCCAU.A.G..G...CC..CAGGGA..GUACUGCGG..UCAGG
GAU.G.ACGCU.GGA...A..AUCUG....GG.U...G.CU..G.AAUGUU
>G.complanata.1 D00061.1/1-120
..ACAUGC.GG.C.C.AU.ACU....AA.A.U.GAU...GA..........U.GU.A...
.......C..CGG....A.UC....CCAUCUC......GA.ACUCC.GA.AGUCAA.G..
...............GCAUUUC.A.G..G...CA..GGGCUA..GUACUGACG..AUAGA
GAU.G.AGUCC.GGA...A..CCCCC....UG.U...G.CC..G.CAUGU.
>G.compressa.1 X00999.1/1-121
..ACAUUC.GG.C.C.AU.AUC....AA.GUU.G.A...CA..........A.AC.G...
.......C..CGU....A.UC....CCAUCCC......GA.ACUAC.GA.AGCUAA.G..
...............UCACUUU.G.A..G...CU..GGGCUA..GUACUGAGA..UGAGG
GAU.C.GGUCU.GGA...A..UCCCC....AG.U...G.CU..G.AAUGUU
>C.crispata.1 D00062.1/1-121
..ACAUUC.GG.C.C.AU.ACC....AG.G.ACG.A...CA..........A.AU.A...
.......C..CCC....A.UC....CCAUCUC......GA.ACUGG.GC.AGUUAA.G..
...............UCUCCUC.G.G..G...CG..CGCUUA..GUACUGAGG..UCAGG
GAU.G.ACUCG.GGA...A..UCGCG....CG.U...G.CU..G.AAUGUU
>P.palmata.1 Z18289.1/4653-4769
..CUUGAU.AC.U.U.AU.AGC....GC.A.G.U.G...GA..........C.CC.A...
.......CA.UCG....A.UC.....CAUCCC......GA.ACUCG.AU.UGUUAA.A..
...............CACUACA.G.C..G...GC..AAUGA....UACUGAAG...GGGA
AGC.C.UUUUG.GGA...A...AGUA....GC.U.C.A.GU..G.CCAAGG
>P.palmata.2 X05541.1/1-121
..ACAUGC.GG.C.C.AU.AGU....GCAG.G.A.A...CA..........U.GC.G...
.......C..CGA....A.AC....CCAUCCC......GA.AUUUC.GA.AGCUAA.G..
...............CUCCGCC.A.C..G...CA..CGAUUA..GUACUCUGG..AGGGG
GAC.C.ACAGU.GGA...A..UCUCG....UG.U...G.CC..G.CAUGUU
>C.reinhardtii.1 X02706.1/2-120
..UGGAUC.GU.U.C.AA.ACC....UU.C.A.A.G...GC..........C.CC.U...
.......C..CCC....A.UC....CCAUCA.......GC.ACUGG.GA.AGAUAA.G..
...............CCUGAAU.G.G..G...CU..GAACUA..GUAGUACGG..UGGGG
GAC.C.ACGUG.CGA...A..UCCUC....AG.U...G.AC..G.ACCUGG
>Chlamydomonas.1 K02345.1/1-118
..AUGGUC.GU.U.C.AU.ACU....AG.C.A.C.U...AC..........U.GC.A...
.......C..CCU....A.AC....CCGUCA.......GA.UCUAG.GA.AGUUAA.G..
...............CGUGCUC.A.G..G...CG..AGGCCA..GUAGUACGG..UGGGU
GAC.C.ACGUG.CGA...A..GCCCU....CG.U...G.AC..G.AUCGU.
>C.reinhardtii.2 X02707.1/2-120
..UGGAUU.GC.U.U.AU.ACC....UU.U.A.U.G...AA..........A.AC.U...
.......C..CCC....A.UC....CCAUUA.......GC.ACUGG.GA.AGAUAA.G..
...............UAUGAAU.G.G..G...CU..GAAUCA..GUAGUACGG..UGGGG
GAC.C.ACGUG.CGA...A..CCCUC....AG.U...G.AC..G.ACCUGU
>S.obliquus.1 M10202.1/3-117
...GCUAC.GU.U.C.AU.ACC....AC.C.A.C.G...AA..........A.GC.A...
.......C..CCG....A.UC....CCAUCA.......GA.ACUCG.GA.AGUUAA.A..
...............CGUGGUU.G.G..G...CU..UGAUUA..GUACUGGGU..UGAGG
GAU.C.ACCUG.GGA...A..CCCCG....AG.U...G.AC..G.UAG...
>P.minor.1 X52051.1/2-120
..UGAUGC.GU.U.C.AU.ACU....AC.U.U.C.G...AA..........A.GC.A...
.......C..CCG....A.UC....CCAUCA.......GA.ACUCG.GA.AGUUAA.G..
...............CGGAGUU.A.G..G...CC..GGUCUA..GUACUGAGU..UGAGU
GAU.C.ACUCG.GGA...A..UCACC....GG.U...G.AC..G.CAUUGC
>Prasinocladus.1 X52047.1/2-120
..UGCUAC.GU.U.C.AU.ACC....AC.U.C.A.G...AA..........A.AC.G...
.......C..CGG....G.UC....CCAUCA.......GA.UCCCC.GA.AGCUAA.G..
...............CUGAGUU.G.G..G...CU..GGAUUA..GUACUGGAU..UCAGG
AAU.G.AUCUG.GGA...A..UCCCC....AG.U...G.AC..G.UAGUGU
>T.subcordiformis.1 X52048.1/2-120
..UGCUAC.GA.U.C.AU.ACC....AC.U.U.A.G...AA..........A.GC.A...
.......C..CCG....G.UC....CCAUCA.......GA.CCCCG.GA.AGUUAA.G..
...............CUGAGUU.G.G..G...CU..GGACUA..GUACUGGAU..UCAGG
AAU.G.AUCUG.GGA...A..UCCCC....AG.U...G.UC..G.UAGUGU
>Chlorella.1 M10358.1/2-120
..UGCUAC.GU.U.C.AU.ACC....AC.C.A.C.G...AA..........A.GC.A...
.......C..CCG....A.UC....CCAUCA.......GA.ACUCG.GA.AGUUAA.A..
...............CGUGGUU.G.G..G...CU..CGACUA..GUACUGGGU..UGAGG
GAU.U.ACCUG.GGA...A..CCCCG....AG.U...G.AC..G.UAGUGU
>C.moniligera.1 M38645.1/2-120
..CGCUAC.GG.C.C.AU.ACC....AG.C.G.A.G...AA..........A.GC.U...
.......U..CAG....A.UC....CCAUCA.......GA.ACUCU.GC.AAAUAA.G..
...............CUCGUUU.G.G..G...CG..CCACUA..GUAACAGGG..UUAGU
AAU.A.ACCUG.UGA...A..CCUGG....UG.U...G.CU..G.UAGUGC
>U.pertusa.1 V01420.1/2-120
..UGAUAC.GG.U.C.AU.ACC....AC.C.A.G.G...AA..........A.AC.A...
.......G..GCG....A.UC....CCAUCU.......GA.ACUCG.CA.ACUUAA.G..
...............CCUGGUU.G.G..G...CA..GGAUUA..GUACUGGGC..UGAGU
GAU.C.UCCUG.GGA...A..UCCCC....UG.U...G.CU..G.UAUCGC
>N.flexilis.1 M10437.1/2-120
..UGGUAC.GG.U.C.AU.ACC....AC.G.G.C.U...AA..........U.GC.G...
.......C..CCG....A.UC....CCAUCC.......GA.ACUCG.GA.AGCCAA.G..
...............CGCCGUU.G.G..G...CC..GGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCC....GG.U...G.CU..G.UACCUA
>C.scutata.1 X52052.1/4-118
..GUU..C.CA.U.C.AU.ACC....AU.G.C.C.U...AC..........U.AC.G...
.......C..CGC....A.UC....CCAUCA.......GA.ACUGC.GA.AGCUAA.G..
...............CGGCAUU.G.G..G...CC..AGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....GG.U...G.UG..G...AACC
>A.punctatus.1 X01620.1/1-118
...GGUGC.GG.U.C.AU.ACC....AG.G.G.C.U...AC..........U.AC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GU.AGUUAA.G..
...............CGCCCUU.G.G..G...CC..GGAUCA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...G.CU..G.CACCCU
>P.trichomanes.1 X01619.1/1-119
..GGAUGC.GG.U.C.AU.ACC....AA.G.G.C.U...AC..........U.AC.A...
.......C..CAG....A.UC....CCAUCA.......GA.ACUCU.GA.AGUUAA.G..
...............CGCCUUU.G.G..G...CC..GGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...G.CU..G.CAUCCA
>S.pennata.1 AF033641.1/428-544
..UCUGGU.GU.C.U.UA.GGC....GU.A.G.A.G...GA..........A.CC.A...
.......CA.CCA....A.UC.....CAUCCC......GA.ACUUG.GU.GGUGAA.A..
...............CUCUACU.G.C..G...GU..GACAA....UACUGUAG...GGGA
AGC.C.CUACG.GAA...A...AAUA....GC.U.C.G.AC..G.CCAGGA
>L.heterophylla.1 X01618.1/1-119
..GGAUGC.GG.U.C.AU.ACC....AA.G.G.C.U...AC..........U.AC.A...
.......C..CAG....A.UC....CCAUCA.......GA.ACUCU.GC.AGUUAA.G..
...............CGCCUUU.G.G..G...CC..GGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...G.CU..G.CAUCCA
>M.polymorpha.1 X01617.1/1-119
..GGAUGC.GG.U.C.AU.ACC....AG.G.G.C.U...AC..........U.AC.A...
.......C..CAG....A.UC....CCAUCA.......GA.ACUCU.GC.AGUUAA.G..
...............CGCCCUU.G.G..G...CC..GGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...G.CU..G.CAUCCA
>Lycopodium_clavatum_.1 M10435.1/2-120
..UGGUGC.GG.U.C.AU.ACC....AG.C.A.C.U...AC..........U.AG.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CC..UGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A...GUCC....GG.G.U.G.CC..G.CACCCU
>E.arvense.1 X00377.1/2-120
..UGGUGC.GG.U.C.AU.ACC....AG.C.G.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGCGCUU.G.G..G...CC..AGAACA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....GG.U...G.CC..G.CACCCC
>D.acuminata.1 X00378.1/2-120
..UGGUGC.GG.U.C.AU.ACC....AG.C.G.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGCGCUU.G.G..G...CC..AGAACA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....GG.U...G.CU..G.CACCCU
>P.nudum.1 M10436.1/2-120
..UGGUGC.GG.U.C.AU.ACC....AC.C.G.U.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCGUCG.......GA.ACUCC.GU.AGUUAA.G..
...............CGCGCUU.G.G..G...CC..GGAAUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...G.CC..G.CGCCCA
>M.glyptostroboides.1 M10432.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.G.U.U...AG..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGCGCUU.G.G..G...CC..GGAGUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCC....GG.U...A.UU..G.CACCCU
>C.revoluta.1 M10434.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.G.U.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGCGCUU.G.G..G...UU..GGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....AA.U...A.UU..G.CACCCU
>G.biloba.1 M10433.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.G.U.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CACGCUU.G.G..G...CU..GGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCC....AG.U...G.UU..G.CACCCU
>E.kokanica.1 X06996.1/1-118
..GGGUGC.GA.U.C.AU.ACC....AG.C.G.U.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGCGCUU.G.G..G...CU..AGAGUA..GUACUGGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....AG.U...G.UU..G.CACCC.
>G.gnemon.1 X06995.1/1-119
..GGGUGC.GA.U.A.AU.ACC....AC.C.G.C.U...AA..........C.GU.A...
.......U..CGG....A.UC....CGAUCA.......GA.ACUCC.GU.AAUUAA.G..
...............CGCGCUU.G.G..G...CU..AGAGUA..GUACUGGGA..UGGGU
GAC.C.UCUCG.GGA...A..GUCCU....AG.U...G.UU..G.CACCCA
>L.minor.1 X06840.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AG..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGCA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CACCCU
>A.minus.1 AF101250.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CACCCC
>T.fosteriana.1 DQ840051.1/217-335
..GGGUGC.GA.U.C.AU.ACU....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CUAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CAUGCUU.G.G..G...CC..AGAGUA..GUACUAGGA..UGGGG
GAU.C.UCCUA.GUA...A..GUCCU....UG.U.U.A..G..G.UGGUCA
>O.sativa.1 M18171.1/1-119
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....UG.U...G.UU..G.CAUCCC
>O.sativa.2 M18170.1/1-119
..GGAUGC.GA.U.C.AU.ACG....AG.G.A.C.G...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....UG.U...G.UU..G.CAUCCC
>A.barbata.1 EF064607.1/193-298
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.CG.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..U....
..........G.GGU...G...ACCU....CG.U...G.UU..G.CAUCCC
>H.bromoides.1 AJ390167.1/190-313
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.G...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CGA.GAGUA...GUACUAGGA..UGGGU
GAC.CUCCGAG.AGU...A.GUACUA.GGAUG.G...G.UG..A.CCUCCC
>H.bromoides.2 AJ390158.1/188-305
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGG
..C.G.AGAGU.AGU...A.CUAGGA....UG.G...G.UG..A.CCUCCU
>H.imberbe.1 DQ832176.1/170-287
..GGAUGC.UA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUAC.GA.AGUUAA.G..
...............CGUGCUU.G.G..C...GA..GAGUA...GUACUAGGA..UGGGU
GAC.C.UCCUA.GGA...A...GUCC....UC.A.U.G.UU..G.CAUCCC
>A.tauschii.1 AF150533.1/320-444
..UAAAGC.AC.C.G.AU.CCCC...GG.U.A.C.C...GAGCUCG.....A.AU.U...
.......C..AGA....A.UC....CCAUUA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.brachyantherum.1 AY034752.1/354-454
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..C....................................GG.AUCCCA.U..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUUC
>H.patagonicum.1 AY544550.1/370-493
..GAUGCC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.ACCG
GAU....C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CAUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GGC.C.UCCUG.GGA...A..GUCCU....CG.U.G.G.U.....GCAUUC
>H.secalinum.1 AF516424.1/400-520
..CUUGCC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GCU.U.GGGCG.AGA...GUAGUACU....AG.G...A.UA..G.GUGACC
>H.secalinum.2 AF516423.1/138-256
..GGUGGC.AA.U.G.GU.ACC....GC.G.U.U.G...UG..........A.AA.G...
.......G..GGG....A.UC....CCAUCA.......GA.ACUUC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...UG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCUUG.GGA...A..GUUCU....CG.U...G.UU..G.CAUUCC
>H.murinum.1 AF096755.1/373-488
..GGAUGCCGA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......AC.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUAU.GUACUAGG....GA..
..U.C.CCAUC.UGA...A...CUC.....CG.A.A.G.UUAAG.CGUGCU
>H.patagonicum.2 AY544260.1/501-381
..UCUGCC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UU....CCAUCA.......GA.AAUCC.GA.AGUUAA.G..
...............CGUGCAU.G.G..G...UG..AGAGUA..CUACUAGGA..UGCGU
GA..C.AUGUC.CGAUGCG...AUCA....UA.C.C.A.GC..A.CUAAAG
>H.muticum.1 AF516460.1/348-446
..GGAUGC.GA.U.C.AU.ACC....AG.C.G.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUAC.GAGAGU.......
...............AGUACUA.G.G..A...UG..GGUGA....CCUCCUGG.......
............GAA...G...UCCU....CG.U...G.UU..G.CAUUCC
>H.patagonicum.3 AY544572.1/31-151
..ACAUGC.G.......U.ACG....UG.C.G.C.G...GAAUAUAUUA..A.GC.A...
..........CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CA..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...G...ACCU....CG.U...A.UU..G.CAUUCC
>H.erectifolium.1 AY544430.1/375-465
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGGAA...................
GU.....................CCU....CG.U...G.UU..G.CAUUCC
>H.brevisubulatum.1 DQ776912.1/370-490
..GGAUGC.GA.U.C.AU.ACU....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCU.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GGG.C.GAGAGUAGU...A.CUAGGA....UG.G...G.UG..A.CCUCCU
>H.pubiflorum.1 AY544566.1/361-487
..GGCAGC.GU.C.G.A...CC....UG.C.A.G.C...CA..........A.GC.UUUU
CACUGGCC..GGG....A.UC....CCAUAA.......GA.ACUCC.GA.AGUUAA.G..
...............CCUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAC.C.UCCUA.GGA...A..GUCCU....UG.U...G.UU..G.CAUUCC
>H.bogdanii.1 DQ776902.1/368-481
..GGAUGC.GA.U.C.AU.ACU....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUGA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAG.....GAUC
GAU.C.CCAUC.AGA...A...CUC.....CG.A...A.GC..G.AAGCGU
>H.cordobense.1 AY034723.1/387-496
..UAGUGC.UG.U.U.AUGAUC....GG.C.A.U.G...AU..........C.CU.A...
.......U..CAG....G.......................ACUCC.GA.AGUUAA.G..
...............CAUGUUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAC.C.UCCUG.GGA...A..GUUCU....CG.U...G.UU..G.CAUUCC
>H.comosum.1 AY544491.1/372-484
..AUGC...GA.U.C.AU.ACC....AG.C.A.C.U...GA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AAUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAG.....GAUU
GAU.C.CCAUC.AGA...A...CUC.....CG.A.A.G.UU..A.AGCGUG
>H.euclaston.1 AF237320.1/326-425
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............UGUGCUU.G.G..G...CG..AGAGUA..GUACU...........
.A..........GGA...A...CAUG....CG.U...A..C..G.UGUGCG
>H.capense.1 AF516403.1/371-484
..UGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UC....CGA...A...GUUA....AG.C.G....U..G.CUUGGG
>H.murinum.2 AF096716.1/373-495
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......G..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCAU.UGC...C...ACCAUUGCCA.C.U.A.UU..G.CCAUCU
>H.patagonicum.4 AY544461.1/401-518
..CGAUGC.UU.U.A.GU.GCU....GG.U.A.U.G...AU..........CGGC.A...
.......U....G....A.UC....CCAUCA.......GA.ACUCC.AA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAUUA..GUUCUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUAC
>H.pubiflorum.2 AY544517.1/371-474
..GGACGC.GA.U.C.AU.AUC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUG..ACCUCCUGG.......
............GAA...G...UCCU....CG.U...G.UU..G.CAUUCC
>H.patagonicum.5 AY544262.1/351-457
....AUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.G...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAG.....GAUU
GAU.C.C.....GGU...G...UUUU....AG.U.G.C.UG..G.UAU...
>H.bogdanii.2 DQ776904.1/441-560
..GAAGGU.AA.G.C.GU.GCU....UG.G.G.C.GAGAGU..........A.GU.A...
.......C..UAG....G.AU....GGGU.........GA.CCUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUA.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.secalinum.3 AF516416.1/267-382
..CGGUGC.GG.U......AUC....CG.U.U.A.U...UA..........G.GA.G...
.......C..GGG....A.UC....CCAUCA.......AA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.brachyantherum.2 AY034776.1/370-483
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............UGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA...GG..
..U.C.UUAAG.UGU...G...CUUG....GG.C.G.A.GA..G.UAGUAC
>H.euclaston.2 AF237322.1/124-242
..AGGGGC.GU.C.G.UU..GC....GG.U.G.G.A...AA..........A.GU.G...
.......GU.CGG....A.UC....CCAUCA.......GA.ACUCC.AA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.euclaston.3 AF237329.1/306-425
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......A..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA...ACAU
GCG.U.ACGUG.UGC...G..GAAUA....UA.U.UAA.GC..G.CGGUUC
>H.muticum.2 AF516462.1/347-450
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.........................UCC.CA.U...CA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAC.C.UCCUG.GGA...A...GUCG...UCG.U...G.UU..G.CAUUCC
>H.patagonicum.6 AY544266.1/386-501
..CAUGCC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAG.....GAUC
GAU.C.CCAU..CAA...A...ACUC....CG.A.A.G.UU..AAGCGUGC
>H.cordobense.2 AY034715.1/370-504
..GCAUGG.AC.U.C.AU.ACC....AG.C.A.C.U....A..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.AA.AGUUAA.GCG
UGCUUGGGCGAGAGUAGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.capense.2 AF516401.1/456-574
..GAUGCC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAC.C.UCCGA.AGU...U..AAGCG....UG.C...U.UG..G.GCGAGA
>H.secalinum.4 AF516427.1/370-470
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..C....................C...............GA.AGUUAA.G..
...............CGUGCUU.G.G..U...UG..AGAGUA..GUACUAGGA..UGGGU
GAC.U..CUUG.GGA...A...GUCC....UC.G.U.G.UU..G.CAUUCC
>H.brevisubulatum.2 DQ776911.1/373-483
..UGCGA.....U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.......CGU...G...CUUG....GG.C.G.A.GA..G.UAGUAC
>H.secalinum.5 AF516438.1/428-540
..CCGAUC........AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GCU.U.GGGCG.AGA...G..UAGUA....CU.A.G.......G.AUAGGU
>H.flexuosum.1 AF237335.1/140-258
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.patagonicum.7 AY544489.1/356-472
..GGGGGU.AA.C.A.UG.G......UG.G.A.U.G...UU..........A.UU.A...
.......U..AGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A...GUCC....UC.A.A.G.UU..G.CAUUCC
>H.patagonicum.8 AY544351.1/286-392
..UUCAA..........A.ACU....AA.A.A.U.G.................GC.C...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U.G.........UUGCAU
>H.cordobense.3 AY034724.1/369-476
..GGAUGC.GA.U.C.AU.ACC....CG.C.A.C.U...AA..........A.GC.A...
.......C..UGG................AUC............CC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UAGGU
GAU.C.UCCUG.GGA...A..GUCCU....CG.U...A.UU..G.CAUUCC
>H.stenostachys.1 AY544288.1/150-264
..GCUUG..GG.C.G.AG.AGU....AG.U.A.C.U...AG..........G.A......
..........UGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUGCUAGGA..UAGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>H.patagonicum.9 AY544260.1/513-620
..AGUGCU.GG.U.A.UG.AUC....GG.C.A.U.G...AU..........C.CC.A...
.......U..CAG....A.......................ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU....GCAUUC
>K.alatavica.1 U62086.1/19-126
..GAAAGUUAA.G.C.GU.GCU....UG.G.G.C.G...AG..........A.GU.A...
.......G..UAC....U.........................AGG.AU.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>T.monococcum.1 AF150518.1/228-354
..UAAAGC.AC.C.G.GA.UCC....GG.U.G.C.U...UU..........A.GU.G...
.......C..UGGUAUGA.UCGGCACCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAUGA..UGGGU
GAC.C.UCCUG.GAA...A..GUCCU....CG.U...G.GU..G.CAUUCC
>T.dicoccoides.1 AY313646.1/296-411
..GGAUGC.UA.U.C.AU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..CGG....A.UC....CCAUCC.......GA.ACUCC.AA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AAGUA...GUAUUAGAU..AAG..
UAC.C.UCCUG.GAA...A..GUCCU....CG.U...G.UU..G.CAUUCC
>B.vulgaris.1 X05059.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CACCCC
>C.zawadskii.1 EF175853.1/1-105
..GGGUGC.GA.U.C.GU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C...CG....A.UC....CCAUCA.......GA.ACUCU.UU.AGUUAA.A..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUGGCU..U....
..........G.GGU...G...AAC.....CG.C.A.A.UU..U.CUUUUC
>C.zawadskii.2 EF175854.1/1-112
..GGGUGC.GA.U.C.GU.ACC....AG.C.A.C.U...AA..........A.GC.A...
.......C..C.G....A.UC....CCAUCA.......GA.ACUCU.GC.AGUUAA.G..
...............CGUGCUC.G.G..G...CG..AGAGUA..GUACUGGCU..UGGGU
GAC.C.......CGC...A...AUUU....CU.U...U.UC..C.UUCUUA
>L.sativa.1 X56490.1/1-119
..GGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.CCCUG.GGA...A..GUCCU....UG.U...G.UU..G.CACCCC
>S.lycopersicum.1 X55697.1/1-119
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........C.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GA.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.CCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAUCCC
>C.sativus.1 AJ318074.1/3315-3429
..UCUGGU.GU.C.C.UA.GGC....GU.A.G.A.G...GA..........A.GC.A...
.......C..ACC....A.AU....CCAUCC.......AU.CCUGG.U..GGUUAA.A..
...............CUCUACU.G.C..G...GU..GACGA....UACUGUAG...GGGA
GGU.C.CUGCG.GAA...A...AAUA....GC.U.C.G.AC..G.CCAGGA
>Glycine_max_soybean.1 X15199.1/158-276
..AGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CACCUC
>P.vulgaris.2 X06843.1/1-119
..GGUUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.CCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CAACCC
>P.vulgaris.3 X06844.1/1-119
..AGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.CACUUU
>T.repens.1 AF072692.1/240-358
..AGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....UG.U...G.UU..G.CACCUC
>B.nigra.1 X65710.1/35-152
..GGGUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....CG.U...G.UU..G.CACCC.
>A.suecica.1 AY130476.1/307-424
..GGAUGC.GA.U.C.AU.ACC....AA.C.A.A.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.C..
...............A.UGCUU.G.G..A...CA..UGAGGA..GUACUACGA..UGAGU
GAA.C.UCCCG.GGA...A...GUCC....UC.C.A.A.UU..G.CAUCCC
>A.thaliana.1 AF331021.1/183-301
..GGAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGUA..GUACUAGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....CG.U...G.UU..G.CAUCCC
>A.thaliana.2 AF330846.1/196-319
..NGUAGG.GA.U.C.AU.ACC....AG.C.A.N.U...NA..........U.AC.A...
.......C..GAG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............NGUGCUU.G.G..G...CG..AAUAUU..GUAAUAGGA..UGGGU
GAC.C.UCCCG.GGA...A.GUCCUNGUGUUG.C...A.UC..C.CUCUUU
>A.thaliana.3 AF330837.1/213-340
..GUAUGC.GA.U.C.AU.ACC....AG.C.A.C.U...RA..........U.AC.A...
.......CAGUAG....A.UC....CCRWUYCCCAUCAGA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AAUAUU..GUACUAGGA..UGGGU
GAC.C.UCCCG.GGA...A..GUCCU....CG.U...G.UU..G.CAUCCC
>G.hirsutum.1 X13040.1/1-118
...GGUUC.AA.U.C.AU.ACC....GA.C.A.C.U...AA..........U.GC.A...
.......C..CGG....A.UC....CCAUCA.......GA.ACUCC.GC.AGUUAA.G..
...............CGUGCUU.G.G..G...CG..AGAGCA..GUACUAGGA..UGGGU
GAC.C.UCCUG.GGA...A..GUCCU....CG.U...G.UU..G.AACCCU
>K.flaccidum.1 X52049.1/2-120
..UGGUUC.GU.U.C.AU.ACC....UA.G.G.C.U...AU..........U.GC.G...
.......C..CGG....A.UC....CCAUCA.......GA.CCUCC.GA.AGCUAA.A..
...............GGCCUGU.G.G..G...CG..AGAAUA..GUACUGGAA..UGGGU
GAC.C.UUCCG.GGA...A..GUCCU....CG.U...G.AC..G.AACCCA
>Spirogyra.1 M10438.1/2-120
..UGCUAC.GG.U.C.AU.ACC....AC.C.A.C.G...AA..........A.GC.A...
.......C..CCG....A.UC....CCAUCA.......GA.ACUCG.GA.AGUUAG.A..
...............CGUGGUU.G.G..G...CC..AGAUUA..GUACUGGGU..UGAGG
GAU.C.ACUUG.GGA...A..CCCCU....GG.U...G.CU..G.UAGUGU
>S.grevilleana.1 X52050.1/1-119
..AGGUAC.GA.U.C.AU.ACC....CG.G.G.U.U...AC..........U.AC.G...
.......C..CGG....A.UC....CCAUCC.......GA.ACUCC.GC.AGCUAA.G..
...............UCCCCGU.G.G..G...CU..CGAAUA..GUACUGGCU..AGGGU
GAC.C.CGCCG.GGA...A..GUCCG....AG.U...G.UC..G.UACCUU
>D.tenue.1 D00058.1/1-118
..AGGAAC.GA.C.C.AU.ACC....AC.G.A.U.G...CC..........A.AU.A...
.......C..CGC....U.UC....CCGUCU.......GC.UCAGC.GA.AGUCAA.G..
...............CAUCGUC.G.G..G...CC..CGGUUA..GUACUACGG..UGGGG
GAC.C.ACGUU.GGA...A...UCCC....GG.G.U.G.UU..G.UUCUU.
>H.foetidus.1 D00059.1/1-118
..AUGAAC.GG.U.C.AU.AUC....AC.G.U.A.A...AC..........U.GC.A...
.......C..CCG....G.UC....UCGUCC.......GA.UCCCG.GA.AGUUAA.G..
...............CUGCGUC.G.A..G...UC..CAGCCA..GUAGUACGG..UGCGU
GAG.C.ACGUG.CGA...A..GCCUG....GG.U...A.CU..G.UUCGU.
>S.aggregatum.1 X06104.1/1-119
..ACAGCC.GU.U.C.AU.ACC....AC.A.C.G.G...AG..........A.AU.A...
.......C..CGG....A.UC....UCGUUC.......GA.ACUCC.GC.AGUCAA.G..
...............CCGUGUC.G.G..G...CG..UGCUCA..GUACUACCA..UAGGG
GAC.U.GGGUG.GGA...A..GCGUG....CG.U...G.AC..G.GCUGUU
>T.visurgense.1 X06103.1/1-119
..AUGAGC.CC.U.C.AU.AUC....AU.G.U.G.G...AG..........U.GC.A...
.......C..CGG....A.UC....UCAUCC.......GA.ACUCC.GU.AGUUAA.G..
...............CCACAUA.G.A..G...CG..CGUCUA..GUACUGCCG..UAGGG
GAC.U.AGGUG.GGA...A..GCACG....CG.U...G.GG..G.CUCAUU
>P.cinnamomi.1 EF661646.1/1509-1627
..GUAGAC.GG.C.C.AU.CUU....AG.G.C.U.G...AA..........A.UC.A...
.......C..CGU....A.UC....CCGUCU.......GC.UCUGC.GA.AGUUAA.G..
...............CAGCCUC.A.A..G...CU..CGGGUA..GUACUCGGG..UGGGU
GAC.C.ACCGG.GGA...A..GUCCG....GG.U...G.CU..G.UCUACA
>S.ferax.1 X01545.1/1-118
..GGAAUC.GG.C.C.AU.AUU....AG.C.C.U.G...AC..........U.AG.A...
.......C..UGC....A.UC....CCGUCC.......GC.UCUGC.AA.AGUUAA.C..
...............CAGGCUC.A.A..G...CG..UGGGUA..GUACUCAGG..UGGGU
GAC.C.ACUGG.GGA...A..GUCCA....CG.U...G.CU..G.AUUCU.
>A.crinita.1 X05535.1/1-118
..AGGAAC.GG.C.C.AU.ACC....AC.G.U.C.G...AU..........C.GC.A...
.......C..CAC....A.UC....CCGUCC.......GC.UCUGU.GA.AGUUAA.G..
...............CGACGUC.G.G..G...CC..AGGCUA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGA...A..GCCCU....GG.U...G.CU..G.UUCCU.
>P.littoralis.1 X61179.1/2828-2944
..CUUGGU.GU.U.U.AA.AGG....AU.A.G.U.G...GA..........A.CC.A...
.......CA.UUG....A.UC.....CAUAUC......GA.ACUCA.AU.GGUGAA.A..
...............CAUUAUU.A.C..A...GU..AACAA....UACUUAAG...GAGG
AGU.C.CUUUG.GGA...A...GAUA....GC.U.U.A.UG..C.CUAAGA
>C.flagelliformis.1 X05534.1/1-118
..AGGAAC.GG.C.C.AU.ACC....AC.G.C.C.G...AU..........C.GC.A...
.......C..CAU....A.UC....CCGUCC.......GC.UCUGU.GA.AGUUAA.G..
...............CGGCGUC.G.G..G...CC..AGGCUA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGA...A..GCCCU....GG.U...G.CU..G.UUCCU.
>S.lomentaria.1 D16558.1/6715-6832
..AGGAAC.GG.C.C.AU.ACC....AC.G.C.C.G...AU..........C.GC.A...
.......C..CAC....A.UC....CCGUCC.......GC.UCUGU.GA.AGUUAA.G..
...............CGGCGUC.G.G..G...CC..AGGCUA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGA...A..GCCCU....GG.U...G.CU..G.UUCCU.
>S.fulvellum.1 X05533.1/1-118
..AGGAAC.GG.C.C.AU.ACC....AC.G.U.C.G...AU..........C.GC.A...
.......C..CAC....A.UC....CCGUCC.......GC.UCUGU.GA.AGUUAA.G..
...............CGGCGUC.G.G..G...CC..GGGCUA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGA...A..GCCCC....GG.U...G.CU..G.UUCCU.
>E.bicyclis.1 X05532.1/1-118
..AGGAAC.GG.C.C.AU.ACC....AC.G.U.C.G...AU..........C.GC.A...
.......C..CAC....A.UC....CCGUCC.......GC.UCUGU.GA.AGUUAA.G..
...............CGGCGUC.G.G..G...CC..AGGCUA..GUACUACGG..UGGGG
GAC.C.ACGUG.GGG...G..ACCCU....GG.U...G.CU..G.UUCCU.